Gene Information

Name : pyk (CLH_3086)
Accession : YP_001922463.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3326418 - 3327833 bp
Length : 1416 bp
Strand : -
Note : identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064

DNA sequence :
ATGAGAAAGACTAAAATGATTTGTACTATTGGACCAGCAAGTGAAGACAGAGAAATATTAGAACAAGTAATGTTAGCAGG
AATGAATGCTTCAAGACATAACTTTTCACACGGTGATCACGAAGAACATAGAGGAAGAATAGAAAAAGTTAAAGAATTAT
CAAAGAAACTTGATAAAGAAATAGCTATCATCCTTGATACAAAAGGACCAGAAATAAGAACTGGAAAATTCGAACCAAAC
AAAGTTGAATTAGTTAAAGGTACAGAATTTACAGTATATGCAGGAGATATGTCAGTAGTTGGAGACACTACAAAGTGTGC
AGTTACTTACGAAGGATTAGCTAATGATGTTAAACCAGGAAACACTATCTTAATAGATGATGGTTTAGTAGGATTAACAG
TTAAATCAGTAGAAGGAAACGCAGTTATCTGTGAAGTTCAAAATACTGGATTAGTTGGAACTCACAAAGGTGTTAATGTA
CCAGGAGTTTCAATCCAATTACCAGCTCTTACTGAAAAAGATAAATCAGATTTAATATTTGGTTGTGAAATGGGAGTTAC
TATGATTGCAGCTTCATTCGTAAGAAAAGCAGCTGACGTAGTAGCAATAAGAAAAGTTCTTGATGAAAATGGTGGAAAGA
ACATATTAATATGCCCTAAAATCGAAAACCAAGAAGGTGTTGATAACATCGATTCAATCTTAGAAATCTCAGATGCTGTA
ATGGTAGCTAGAGGAGATCTAGGTGTTGAAATTCCAATAGAACAAGTACCAGCAGTTCAAAAAATGATCATTCAAAAATG
TAATGCAGCTGGAAAGCCAGTTGTTACTGCAACTCAAATGTTAGATTCTATGATCAGAAACCCAAGACCAACAAGAGCTG
AAGTTTCAGATGTAGCTAACGCTATATTAGATGGTACTGATGCAATAATGTTATCAGGAGAAAGTGCTAACGGAACTTAC
CCAGTAGAAGCTGTTAGAACTATGGCTAAAATTGCTGCAGAAACTGAAAAGCAATTAGCTCATAAAGTTGCTTACTCAAA
TGATAAATCATCAATGTCAGAAGTAATTTCAAGAGCAGCATGTAATGCAGCTAATGAATTAGAAGCAACTGCTATAATTT
CTTCAACTCAAACAGGAGCTACTGCTAAGAGAATATCTAAGTCTAGACCAGACTGTACAATCATAGCTGTTACTCCAGAT
GAAGTAGTAGCAAAACAATTAGCATTCTCATGGGGAGTTTACCCAATAGTTGCTGATAAAATGTCTTCAACTGACGAAAT
GATGACAAAATCAGTTGAAATAGCAAAAGAACATAACTATGTTAAAAATGGTGATACAGTAGTTTTAGCTGCTGGAGTTC
CAGTTGATAAGACAGGAACAACTAACCTATTAAAAGTTAGCGTAGTAGGCGAATAA

Protein sequence :
MRKTKMICTIGPASEDREILEQVMLAGMNASRHNFSHGDHEEHRGRIEKVKELSKKLDKEIAIILDTKGPEIRTGKFEPN
KVELVKGTEFTVYAGDMSVVGDTTKCAVTYEGLANDVKPGNTILIDDGLVGLTVKSVEGNAVICEVQNTGLVGTHKGVNV
PGVSIQLPALTEKDKSDLIFGCEMGVTMIAASFVRKAADVVAIRKVLDENGGKNILICPKIENQEGVDNIDSILEISDAV
MVARGDLGVEIPIEQVPAVQKMIIQKCNAAGKPVVTATQMLDSMIRNPRPTRAEVSDVANAILDGTDAIMLSGESANGTY
PVEAVRTMAKIAAETEKQLAHKVAYSNDKSSMSEVISRAACNAANELEATAIISSTQTGATAKRISKSRPDCTIIAVTPD
EVVAKQLAFSWGVYPIVADKMSSTDEMMTKSVEIAKEHNYVKNGDTVVLAAGVPVDKTGTTNLLKVSVVGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-110 54
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-110 54
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-110 54
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-109 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_001922463.1 pyruvate kinase VFG0479 Protein 4e-111 54