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Name : CLH_2929 (CLH_2929) Accession : YP_001922306.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Virulence Product : Cap5D Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : 1.1.1.- Position : 3115297 - 3117159 bp Length : 1863 bp Strand : - Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGAGAAATTGGAAGACATTAATAATTATGATAATTGATATATTTATGGTAAATATGGCATACCTTTTTGCTATAAATAT AACTTTAAGTGGAAGGTTCACAGAAATTGCAAAAATATATACAGAAGATGTTATAGCTGTAAGTTTAATATATTTAGTGT GTTTTTACTTATTTAAAATGTATGAAAGTTTGTGGCATTTAACAGGAACAGATGAATTTTTACTAGGTGTTGGAGGATCA ATTTTAGCAGGAATATTATCAATTGGATATACTAGATTTTGGGGATCTGTTATCCCATTAAATGTTTCAGTTGTAGGAAT TCTTTTAAGTATTTTCTTTGTATTAGGTTATAGAATTTTATACAGAGTATATAGAAGAACATTATTGTACATACCATTTA AGTATTCATCAGATCAAAGAAGAGTAATGATTGTTGGTGCTGGTTCAGCAGGAACTATGATTATTAATGAAATGATGGCA AGAAGAGAATTGAAATATAATCCAATAGTTCTTATTGATGATGATAAAGAAAAACTTGGAAGAAGAATTTCAGGGGTAAA GATAGTAGGAAATAGATACGACATACCATATGTTGTAGGAGAGCAAGAGATTGATCTAATATTAATAGCAATACCTTCTC TTGATTCAAAAAATAAGGCAGAAATTATTGATATTTGTAAAAAGACTAATTGTAAGCTTCAAATAATTCCAGGTATATAC GAAATACTAAGTGGAGATGCAAATGTTAGTAGAATTAAAGATGTAGATTTAGAAGATTTACTAGGAAGAGATCCTATTGT ATTGGATAACAAAGGTATCTCAGATTATATACAAGGAAAAACAATATTAGTTACTGGAGCAGGTGGATCAATAGGTTCTG AGCTTTGCAGACAAATATCAGTGTATAATCCTAAAAGACTTATATTATTTGATATATATGAAAACAATATATACGATATT CAAAATGAATTAAAAGAAGAGTTCCCTGATATGAACCTTACTGTTTTGATTGGTTCTATAAGAGACAGACAAAGATTACA TGAGGTATTTAGTAAATATAAAATAAATGTTGTATTCCATGCAGCAGCACATAAACATGTACCATTAATGGAGGACAGTC CTAAAGAAGCTGTTAAGAATAATGTTTTTGGAACATTAAATTTAGCGACTGAAGCAAGTAAAGCTAATATTGATAGATTT GTAATGATTTCTACTGATAAAGCTGTTAATCCAACAAATATAATGGGAGCAACTAAAAGATTATGTGAAATGATTGTTCA AGCTATGGATAAACAGTCAAAAACTGAGTTTGTTGCTGTTAGATTTGGAAATGTTCTTGGTAGTAATGGATCAGTAATTC CATTATTTAAAAAGCAAATAGCTAATGGTGGTCCAGTTACGCTTACTCATAAAAAGATAGTTAGATACTTTATGCTGATT CCAGAAGCAGCTCAATTGGTGCTTCAAGCAGGTGCATTTGCTAAGGGTGGAGAAGTATTTGTACTAGATATGGGAAAACC AGTTAAGATTTACGATTTAGCTTGTGATCTTATAAGACTTTCAGGGTTTGAGCCTAATAGGGACATTAAAATAGTAGTTA CTGGACTTAGACCAGGGGAAAAATTATACGAAGAGCTTTTAATGAGTGAAGAAGGTTTAAAAGATACTGACCATCAAAAG ATATATGTTGGAAAACCAACTTTTGAAGATATGGACACATTAAATTATAAGCTTGAACAATTACGCAAGTTATTAGAGTT AAATGATATAAATGAAATTAAACATCAAATGCAAACTATTGTTCCAACATATCATTACAAAAACGAAGATGAAGTTGCAG CAGAAAATGCTGATAAGGAGTAA Protein sequence : MRNWKTLIIMIIDIFMVNMAYLFAINITLSGRFTEIAKIYTEDVIAVSLIYLVCFYLFKMYESLWHLTGTDEFLLGVGGS ILAGILSIGYTRFWGSVIPLNVSVVGILLSIFFVLGYRILYRVYRRTLLYIPFKYSSDQRRVMIVGAGSAGTMIINEMMA RRELKYNPIVLIDDDKEKLGRRISGVKIVGNRYDIPYVVGEQEIDLILIAIPSLDSKNKAEIIDICKKTNCKLQIIPGIY EILSGDANVSRIKDVDLEDLLGRDPIVLDNKGISDYIQGKTILVTGAGGSIGSELCRQISVYNPKRLILFDIYENNIYDI QNELKEEFPDMNLTVLIGSIRDRQRLHEVFSKYKINVVFHAAAHKHVPLMEDSPKEAVKNNVFGTLNLATEASKANIDRF VMISTDKAVNPTNIMGATKRLCEMIVQAMDKQSKTEFVAVRFGNVLGSNGSVIPLFKKQIANGGPVTLTHKKIVRYFMLI PEAAQLVLQAGAFAKGGEVFVLDMGKPVKIYDLACDLIRLSGFEPNRDIKIVVTGLRPGEKLYEELLMSEEGLKDTDHQK IYVGKPTFEDMDTLNYKLEQLRKLLELNDINEIKHQMQTIVPTYHYKNEDEVAAENADKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-99 | 51 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-99 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLH_2929 | YP_001922306.1 | Cap5D | VFG1300 | Protein | 2e-99 | 47 |
| CLH_2929 | YP_001922306.1 | Cap5D | VFG0029 | Protein | 8e-86 | 43 |
