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Name : CLH_2476 (CLH_2476) Accession : YP_001921857.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Unknown Product : site-specific DNA recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 2645054 - 2645770 bp Length : 717 bp Strand : - Note : identified by match to protein family HMM PF00239; match to protein family HMM PF07508 DNA sequence : ATGAACAAGAAAAAGATAATAGCAATATATTGTAGGGTATCAACTATAGAACAAGCCGAAGAAGGGTATAGCATAGATGA ACAACAAAGATTATTAATTGAATATGCCAATAAGATGGGTTATGAGATTTATAAATGCTATTCAGATAGAGGAATTAGTG GCAAGAACATTAAGAATAGACCAGCATTAAAAGAACTTTTAAAAGATACAGATGAAGGTAAGTTTGAGATAGTACTTACA TGGAAGATTAATAGGGTTGCAAGAAATATGCTAAATCTATTAGAAATAGTAGATATGCTCGATAAAAGAGGAATAGCTTT TAGGTCATATTCAGAACAATTCGAGACAGAAACGCCTATGGGTAAATTCTCATTGCATATGATGGGAGCAGTTGGCGAAT TGGAAAGAGGTACAATTGCTCAAAACGTAAAAATGGGTATGTGTGCTCGAGCTAGGGATGGAAAGTGGAACGGAAATGTT TTACTAGGATATGATTTAGAAGAGGTTAAAGATTCATTAAATAAGAAAAGAAAGGATACTATACTTGTAATAAATAAAGA AGAAGCAGAATGTGTAAGATTTATTTTTAATGAGTATGCTAATGGAAAAAGATATAAAGCTATAACTAATAGATTGAATA AGTTAGGATATAAGACTAAGAAAGGAAATAATTTTTCAGTAGAGTCAATTAAAGATATACTAACTAATCCTACTTAG Protein sequence : MNKKKIIAIYCRVSTIEQAEEGYSIDEQQRLLIEYANKMGYEIYKCYSDRGISGKNIKNRPALKELLKDTDEGKFEIVLT WKINRVARNMLNLLEIVDMLDKRGIAFRSYSEQFETETPMGKFSLHMMGAVGELERGTIAQNVKMGMCARARDGKWNGNV LLGYDLEEVKDSLNKKRKDTILVINKEEAECVRFIFNEYANGKRYKAITNRLNKLGYKTKKGNNFSVESIKDILTNPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL26661.1 | site-specific recombinase | Not tested | SCCcap1 | Protein | 1e-35 | 45 |
| unnamed | BAB46983.1 | truncated cassette chromosome recombinase | Not tested | Type-IIIinv SCCmec | Protein | 6e-32 | 44 |
