Gene Information

Name : CLH_2364 (CLH_2364)
Accession : YP_001921745.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2540727 - 2541308 bp
Length : 582 bp
Strand : -
Note : identified by match to protein family HMM PF00132

DNA sequence :
TTGAATAATAATATAATTGATTTAGAAAATGCAAAAATGTTACCTGTGAATAATAGACGTTCAAATCTTGAAATTGGAGA
TTTTACTTATGGAATTCCTAATATTCTTACATGGAATGAAGGTACAAAAGTAATAATAGGTAAATTTTGTTCTATTGCTG
GAGAGGTTGATATCTTTTTAGGTGGAAATCATAGAAATGATTGGATAACTACTTATCCATTTAATGTATTATGTGGCAGT
TATAATTATATTAAAGGTCATCCTAGTACCAAAGGCAATGTGATAATCGGAAATGATGTTTGGATAGGAAGGCGTACAAC
TATTTTATCAGGAGTTAATATTGGCAATGGTGTAAGTATAGGTGCAAATTCAGTTATTGCAAAGGATATTCCAAATTATG
CTATAGTTGCAGGAAATCCAGCTAAAATTATACGATATAAATTTGATACAGAAACTATAAATAAACTATTAGAAATATCA
TGGTGGGATTGGGAATTGGAAGATTTAAGGAGAATAGTTCCAATTCTTCAAAGTGGAAATGTGAACGCATTAATTGATTA
CTATAATAAAAATATTAAATAA

Protein sequence :
MNNNIIDLENAKMLPVNNRRSNLEIGDFTYGIPNILTWNEGTKVIIGKFCSIAGEVDIFLGGNHRNDWITTYPFNVLCGS
YNYIKGHPSTKGNVIIGNDVWIGRRTTILSGVNIGNGVSIGANSVIAKDIPNYAIVAGNPAKIIRYKFDTETINKLLEIS
WWDWELEDLRRIVPILQSGNVNALIDYYNKNIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 8e-28 41
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 8e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_2364 YP_001921745.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 1e-27 46
CLH_2364 YP_001921745.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 2e-31 46
CLH_2364 YP_001921745.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 4e-28 41
CLH_2364 YP_001921745.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 4e-28 41