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Name : CLH_1977 (CLH_1977) Accession : YP_001921358.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Resistance Product : penicillinase repressor Function : - COG functional category : K : Transcription COG ID : COG3682 EC number : - Position : 2128710 - 2129093 bp Length : 384 bp Strand : - Note : identified by match to protein family HMM PF03965 DNA sequence : ATGAATGAAATTCCTAAAATATCAAACTCTGAATGGGAAATTATGAAAGTAATATGGAGTCATACTGAAATTACATCAGT CAATATTATATGTGAACTAAAAGATAAAGTAGAATGGAAACCATCTACAATAAAGAGCTTAATAAATAGATTACTAAAAA AGAATGTAATAGGGTTTAAAAGATTAAGTAACGAATATTTATATTTTCCTTTAATAGCAGAAGATGAGTGCATAAAGATA GAAAGCAAATCTTTTATTAATAAAGTTTTCAATGGTTCTGTCAAATCTATGCTTTTAAACTTTGTTGAATCAAAAGAAAT ATCTGAAACAGACATAGAAGAATTAAAGAACATACTCAAACAATCAAATAAAAAGAAAGGTTGA Protein sequence : MNEIPKISNSEWEIMKVIWSHTEITSVNIICELKDKVEWKPSTIKSLINRLLKKNVIGFKRLSNEYLYFPLIAEDECIKI ESKSFINKVFNGSVKSMLLNFVESKEISETDIEELKNILKQSNKKKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mecI | YP_005754043.1 | methicillin resistance regulatory protein MecI | Not tested | Type-XI SCCmec | Protein | 7e-20 | 47 |
| mecI | NP_373280.1 | methicillin resistance regulatory protein | Not tested | Type-II SCCmec | Protein | 2e-20 | 43 |
| mecI | YP_190060.1 | methicillin-resistance regulatory protein MecI | Not tested | Type-II SCCmec | Protein | 2e-20 | 43 |
| mecI | BAA82218.1 | methicillin resistance protein MecI | Not tested | Type-II SCCmec | Protein | 1e-20 | 43 |
| mecI | NP_370567.1 | methicillin resistance regulatory protein | Not tested | Type-II SCCmec | Protein | 3e-20 | 43 |
| mecI | YP_039517.1 | methicillin resistance regulatory protein MecI | Not tested | Type-II SCCmec | Protein | 7e-18 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLH_1977 | YP_001921358.1 | penicillinase repressor | CP001581.1.gene771.p | Protein | 1e-31 | 51 |
| CLH_1977 | YP_001921358.1 | penicillinase repressor | FR823292.1.gene6.p01 | Protein | 2e-20 | 47 |
| CLH_1977 | YP_001921358.1 | penicillinase repressor | NC_009782.5560220.p0 | Protein | 1e-20 | 43 |
| CLH_1977 | YP_001921358.1 | penicillinase repressor | NC_002758.1120003.p0 | Protein | 1e-20 | 43 |
| CLH_1977 | YP_001921358.1 | penicillinase repressor | NC_002745.1122814.p0 | Protein | 6e-21 | 43 |
| CLH_1977 | YP_001921358.1 | penicillinase repressor | NC_002952.2861158.p0 | Protein | 2e-18 | 42 |
