Gene Information

Name : CLH_1950 (CLH_1950)
Accession : YP_001921331.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport ATP-binding protein FepC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2106091 - 2106876 bp
Length : 786 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAATTGTATAAGTACTAAGAATTTGAATATTTCCTATGGAAATTTAGATATAGTTAAAGATTTAAATTTAGATATACC
AAAGGGTAAAATAACTACAATAATAGGTTCTAATGGATGTGGAAAGTCTACTATATTAAAAACTATAGCTAGAATTATAC
AACCTAAAAGTGGTGATATATATGTAAATGATAAAAATATGAAAGAACAAAATCCAAAAGATTTAGCAAAGACTATGGCT
GTTCTTCCACAAAGTCCTACGGCTCCTAGTGGACTTACAGTAGAGGAGTTAATAGCTTATGGAAGATTTCCTCACCAAAA
GGGATTTGGTAAACTAAAAAATGAAGATAAAGATATAGTTACATGGGCATTAAAATCAACTGGAATAGAGGAATTTAGAG
ATAGAACTATGGAGGCTTTATCAGGAGGACAAAGGCAAAGGGCTTGGATAGCAATGGCATTAGCACAACAAACAAATATA
CTTATACTTGATGAGCCTACAACATATTTAGATTTAGCTCATCAATTAGAAGTACTAAAATTATTAGAAGAGTTAAATAG
AAAACAAGGTACAACTATAGTTATGGTAATACATGAACTTAATAATGCAGCTAGATTTGCAGATCATATGATAGGTGTAA
AAAAAGGCGAAGTAGTATGTCAAGGCAGTGCTTATGAGGTTATGACAAAAGAAAATCTTAGAGAATTATTTAATATAGAT
GCTGAAATAGTTAGTGATCCTAGAACTAAAAAACCGGTATGTATAACTTATGATATGGTAATATAG

Protein sequence : 
MNCISTKNLNISYGNLDIVKDLNLDIPKGKITTIIGSNGCGKSTILKTIARIIQPKSGDIYVNDKNMKEQNPKDLAKTMA
VLPQSPTAPSGLTVEELIAYGRFPHQKGFGKLKNEDKDIVTWALKSTGIEEFRDRTMEALSGGQRQRAWIAMALAQQTNI
LILDEPTTYLDLAHQLEVLKLLEELNRKQGTTIVMVIHELNNAARFADHMIGVKKGEVVCQGSAYEVMTKENLRELFNID
AEIVSDPRTKKPVCITYDMVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-51 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-51 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-51 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-51 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-55 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-55 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-55 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-55 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-55 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-52 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-52 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-52 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1950 YP_001921331.1 ferric enterobactin transport ATP-binding protein FepC BAC0164 Protein 9e-56 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLH_1950 YP_001921331.1 ferric enterobactin transport ATP-binding protein FepC VFG1042 Protein 9e-56 44
CLH_1950 YP_001921331.1 ferric enterobactin transport ATP-binding protein FepC VFG0925 Protein 4e-56 43