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Name : serS (CLH_0018) Accession : YP_001919477.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 17662 - 18939 bp Length : 1278 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATTTAAAAAGAATAAGAAACAATCCGGAAGAGATAAAAAAGCTATTATCAAATAGAGGAGAAGACTTTGACGT AGCAGTTATAGATGAAATTGTAACTTTAGATGAAGAAAGAAGAAAAATATTAGTTGAAGTTGAAAGCTTAAAGGGTAAAA GAAATCAAGTTTCAGCAGAAATACCTAAGCTAAAAAAAGCTGGTGAAGATGTTACTCAAATAATGAATGATATGAGAAAA CTAGGAGAAGAAATTAAAAATTTTGATACTAGAGTAAATGAGATAAATGAAAGAATAGAATACATAATGCTTAGAATCCC TAATATTCCAAATCCAGAAGTTCCAGATGGAGAAACTGATGAAGATAATGTTGAAATTAAAAAATGGGGAGAGCCTACTA AATTTACTTTTGAACCTAAAGCTCACTGGGATTTAGGAACTGATCTTAATATCTTAGATTTTGAAAGAGGCGGAAAGGTA GCTGGATCTAGATTTACAGTATACAAAGGATTAGGAGCTAGATTAGAAAGATCAATAATAAACTACTTCCTAGATAAACA CACTACTGAAAATGGATATACTGAAATATTACCACCTTACATGGTTAATAGAGATAGTATGACAGGAACTGGTCAATTAC CTAAATTTGAAGAAGATGCATTTAAAGTAGAAAATAATGGATATTTCTTAATACCAACAGCAGAAGTACCAGTTACGAAT ATGTATAGAAATGAAGTTTTAAGTGGTGATATTCTACCAATAAAACATGCAGCATATTCAGCTTGTTTTAGAGCAGAAGC AGGATCAGCTGGTAGAGATACTAGAGGTCTTGTAAGACAACATCAGTTCAATAAAGTAGAATTAGTTAAGTTCTGTAAAC CAGAAGATTCTTATGCTGAATTAGATAAATTAGTAGAAGATGCTGAATCAGTTTTACAAGGATTGGGATTACCTTATAGA ATAGTTAGAATATGTAAGGGTGATTTAGGATTTACTGCAGCATTAAAATACGACATAGAAGTTTGGATGCCAAGTTACAA TAGATATGTAGAAATTTCAAGTTGTTCTAATTTTGAAGATTTCCAAGCTAGAAGAGCTAATATCAAATATAGAGAAACAC CAAAAGATAAGCCGAAGTTTATCCATACTTTAAATGGATCAGGTGTTGCAATAGGTAGAACTGTAGCAGCAGTATTAGAA AATTATCAAAAAGAAGATGGAACAGTTGAAATTCCAGAAGCAATAAAAAGATTTATGAACGTAGATTTTATAAAATAA Protein sequence : MLDLKRIRNNPEEIKKLLSNRGEDFDVAVIDEIVTLDEERRKILVEVESLKGKRNQVSAEIPKLKKAGEDVTQIMNDMRK LGEEIKNFDTRVNEINERIEYIMLRIPNIPNPEVPDGETDEDNVEIKKWGEPTKFTFEPKAHWDLGTDLNILDFERGGKV AGSRFTVYKGLGARLERSIINYFLDKHTTENGYTEILPPYMVNRDSMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPVTN MYRNEVLSGDILPIKHAAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFCKPEDSYAELDKLVEDAESVLQGLGLPYR IVRICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNFEDFQARRANIKYRETPKDKPKFIHTLNGSGVAIGRTVAAVLE NYQKEDGTVEIPEAIKRFMNVDFIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-120 | 58 |
