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Name : treC (CLH_1687) Accession : YP_001921073.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 1836014 - 1837672 bp Length : 1659 bp Strand : + Note : identified by match to protein family HMM PF00128; match to protein family HMM TIGR02403 DNA sequence : ATGAAAGACTTTAAAAAAAGTACTGTTTATCAAATATATCCTAAATCATTTAATGATTCAAATGGAGATGGAATAGGCGA TTTAATTGGAGTAATAAATAAACTAGATTATTTAGAGGAATTAGGGATTGATTATATTTGGCTTACTCCTTTTTATGTAT CACCACAAAAAGATAATGGCTATGATGTAGCTGATTATTACAATATAGATCCTTTGTTTGGAAGTAATGAAGACTTTGAT AGACTTGTTAAGGAAGCTAAAAAAAGAAATATTAATATAATGCTTGATATGGTGTTTAATCATACTTCAACAGAGCACAA ATGGTTTAAGAATGCCCTAAATGGAGAGAAAAAATTTAAAGACTTCTATATATTTAAAAAAAGCAAAGATGGAAATCCAC CAACTAATTGGCAATCAAAATTCGGAGGAAATGCTTGGGAATATATAGATAAATTTGATGAATACTATTTGCATTTATTT GATAAAACACAAGGAGATTTAGATTGGACTAATTCAGAAGTTAAAAACGAGATATACAAAATAGTAAACCATTGGATAAA TAAAGGTGTTAAAGGATTTAGATTCGATGTTATAAACTTAATTTCAAAACCTGAAAAATTTGAAGATGATACTATAGGTG ATGGAAGAAGATTTTATACAGATGGACCTAATATACATAAATATTTAAAGGAATTAAATAACAATACTTTCGGTAAATAT AACGATATAATAACAGTTGGAGAAATGTCCTCTACAACTATAGATAATTGTATTAAATATTCAAATCCCAATGAAAAAGA ATTATCTATGGTATTTAACTTTCATCATTTAAAAGTAGATTATGATAATGGTGATAAATGGACACTTATGAATTTTGATT TTAAATTACTAAAATCTATCTTCAAGGAATGGCAAGAAGGTATGGAGCATGGAAATGGTTGGAATGCAGTATTTTGGTGT AACCATGATCAGCCAAGAATAATTTCTAGATTTGGAAATACCGATAAGTATCATAAAGAAAGTGGAAAGATGCTTGGAAC TTGTATTCATATGATGAGAGGAACACCATATATTTATCAAGGTGAAGAATTTGGAATGACAAATCCTAATTTTAATTCAA TAGATGAATATAGAGATGTTGAATCTAAAAATTATTATAATATTTTAAAAGAAAATAATGTTGATGAAGAAGAAATATAT AAGATATTAGCATGCAAATCAAGAGATAATTCAAGAACACCTATGCAGTGGAATGATAAAGACAATAGTGGATTTTCAAC AGTCGATCCTTGGATACCAGTTGGAAAGTCTTATAAAGAAATAAATGCAGAAAATGCACTAAAGGATAAGGGATCTATAT TCTATCATTATAAAAAACTTATAGACTTAAGAAAAAAATATGATGTTGTTTCAAATGGAACATTTAAAATGATACTTGAA GAACATGATAAAGTATTAGCTTATACAAGGCAATATAAAAATATAAAATTAATAGTTTTAAATAATTTTTATAATGAAGA TACACAAGTATTATTACCTCAAGATCTTTTAGGTGATGATTGTAGAATACTAATTTCAAATTACGAAGATAGTATGGATT TAAATGATAAAATTTTACTTAGACCATATGAATCTATTGTTTATATTGTTGAGAATTAA Protein sequence : MKDFKKSTVYQIYPKSFNDSNGDGIGDLIGVINKLDYLEELGIDYIWLTPFYVSPQKDNGYDVADYYNIDPLFGSNEDFD RLVKEAKKRNINIMLDMVFNHTSTEHKWFKNALNGEKKFKDFYIFKKSKDGNPPTNWQSKFGGNAWEYIDKFDEYYLHLF DKTQGDLDWTNSEVKNEIYKIVNHWINKGVKGFRFDVINLISKPEKFEDDTIGDGRRFYTDGPNIHKYLKELNNNTFGKY NDIITVGEMSSTTIDNCIKYSNPNEKELSMVFNFHHLKVDYDNGDKWTLMNFDFKLLKSIFKEWQEGMEHGNGWNAVFWC NHDQPRIISRFGNTDKYHKESGKMLGTCIHMMRGTPYIYQGEEFGMTNPNFNSIDEYRDVESKNYYNILKENNVDEEEIY KILACKSRDNSRTPMQWNDKDNSGFSTVDPWIPVGKSYKEINAENALKDKGSIFYHYKKLIDLRKKYDVVSNGTFKMILE EHDKVLAYTRQYKNIKLIVLNNFYNEDTQVLLPQDLLGDDCRILISNYEDSMDLNDKILLRPYESIVYIVEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-122 | 45 |
