Gene Information

Name : CLH_1559 (CLH_1559)
Accession : YP_001920947.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Unknown
Product : DeoR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 1667966 - 1668928 bp
Length : 963 bp
Strand : +
Note : identified by match to protein family HMM PF08279

DNA sequence :
ATGCCAAAAAATGATAATATGCTAGCAATTTTATGGATGCTGAATTCAGGTACAAAAATAACTGCAAAGCAAATATCCGA
AAGGTTAGAAATAAATATAAGGTCAGTTTATCGTTATATGGATGCATTGTGTGTTAGTGGAGTGCCAATAATATCAGAGT
CTGGTCACAATGGCGGATATAGTTTGCTTAACAATTTTATCCGAACACCCCTGTTTTTTGACCTTGAAGAGAAAAAATCA
CTTTTACATGCTGCCATTTTTGCAATGGAAGCAGGATATCCTTTTATGGAAGCACTAAATAGTGCAACATCAAAGTTAAA
AATGTTCTCGAATCAAGAACAAGAAAAAGTTCTTAATCGCCATTTAGTCGGATTTGAAGTAGTGAGTCGTATTTGCGACC
GAGCTGTCAAACTTATATTAAGGGAGATTGAGCAAGCTGTTGCTAATGAATGCTCTATTGAAATTGAATACTGTACAGGT
TATGAAGGGCATCCCAAGCATAGGGTTGTTGACCCCTATGGGATGCTTTACTGGAATAATAAATGGTATGCTATTGCATT
TTGCCATCTTAGGAATGAAATTCGTAGTTTTAGGGTAGATAGAATAGTAAATATTATAAGCACTAAAAATTCATTTAAGC
GTCCTGAAGCTTTTTCGGCACGTGAATTTTTTACAAAAAACTTATTATCGAATGTGGAAAGCAAAGTAGGACTTTGCACT
TTAGTAATTGAGGGCAAATCAGAAGCATTGAATGACCTTTGTGCACATTGGTTTTTAGGATATCATCTTATAGAACGAAC
TGAATGCAGAGCTAATTTTTTAATGGATGAAGACTCAATCCATACCTATGTTCCTCATATTTTACTTCAATATGGTAAAT
CAATAAAGGTGCTTGAACCAAATAGTTTTAAAGATGCTATGGCAGCAATTCTTAGAGAGTTGATGGCCCATTATCTTAAC
TGA

Protein sequence :
MPKNDNMLAILWMLNSGTKITAKQISERLEINIRSVYRYMDALCVSGVPIISESGHNGGYSLLNNFIRTPLFFDLEEKKS
LLHAAIFAMEAGYPFMEALNSATSKLKMFSNQEQEKVLNRHLVGFEVVSRICDRAVKLILREIEQAVANECSIEIEYCTG
YEGHPKHRVVDPYGMLYWNNKWYAIAFCHLRNEIRSFRVDRIVNIISTKNSFKRPEAFSAREFFTKNLLSNVESKVGLCT
LVIEGKSEALNDLCAHWFLGYHLIERTECRANFLMDEDSIHTYVPHILLQYGKSIKVLEPNSFKDAMAAILRELMAHYLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Bsph_2814 YP_001698478.1 DeoR family transcriptional regulator Not tested Not named Protein 2e-93 60