Gene Information

Name : CLH_1395 (CLH_1395)
Accession : YP_001920787.1
Strain : Clostridium botulinum Alaska E43
Genome accession: NC_010723
Putative virulence/resistance : Virulence
Product : iron chelate uptake ABC transporter, FeCT family, ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1491258 - 1492094 bp
Length : 837 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGTTTAAAGTGAAGGTTAGAAATTTAAGGTTTAGCATAGATAAAAAAGAAATATTAAAAGATATATCTTTTGACATTAA
AAAAGGTTCATTTGTAGGAATTATAGGTCCTAATGGTTCGGGGAAATCTACATTACTTAAAAATATATATAGACTTTATA
AGCCATCAAGTGGAAGTATATTATTAGATAATAAAGAATTAGCCAAAATGAAACATAAAGATTGTGCAAAAGAGATTGCA
GTTTTAGCACAAGAAAGTAATACTCATTTTGATTTTACTGTTGAACAAATAGTAAAGATGGGGAGATATCCATATAAATC
TATTTTTGAAGACTATTCTAAAGATGATTTACAAATGGTTAAGGAAATGTTAAAAAAAGTAGGTTTAGAAAGCTATAGTT
CTAGGAGCTTTTCTGAGTTATCAGGTGGAGAAAAACAAAGAACGTTAATAGCAAGAGCATTAGTTCAAAATACTAAATTT
TTAATATTAGATGAACCAACAAATCATTTAGACATAGGCTATCAAATACAACTTATGGATTTAGTTAAAAGTCTTAATAT
AACTACTTTATCAGCTATACATGATATGAATCTAGCATCTATGTATTGTGATTATTTGATTGTAATGAAAGATGGAAGGA
TAAAGAATTTTGGAACAGTAGAAGAAGTAATAAATCCTGAAATGTTAAAAGAGGTATTTGGTGTAAATGCGTATGTGGGA
GTTAACCCTGTAAATAAAAAATTACAAGTATCATTTATGCACACACATAAACATGTCAATGGTCTTGGAACTGATCATAT
ACATGAAGATGGATTTACAGGAGTGCATACTCATTAA

Protein sequence :
MFKVKVRNLRFSIDKKEILKDISFDIKKGSFVGIIGPNGSGKSTLLKNIYRLYKPSSGSILLDNKELAKMKHKDCAKEIA
VLAQESNTHFDFTVEQIVKMGRYPYKSIFEDYSKDDLQMVKEMLKKVGLESYSSRSFSELSGGEKQRTLIARALVQNTKF
LILDEPTNHLDIGYQIQLMDLVKSLNITTLSAIHDMNLASMYCDYLIVMKDGRIKNFGTVEEVINPEMLKEVFGVNAYVG
VNPVNKKLQVSFMHTHKHVNGLGTDHIHEDGFTGVHTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-36 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-36 43