|
Name : CLH_1146 (CLH_1146) Accession : YP_001920540.1 Strain : Clostridium botulinum Alaska E43 Genome accession: NC_010723 Putative virulence/resistance : Virulence Product : alkaline phosphatase synthesis transcriptional regulatory proteinphoP Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1213987 - 1214691 bp Length : 705 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGTCTGATGAAAAAATATTAATAGTAGATGATGAGGAACATATAATAGAATTATTAAAGTTCAATTTGATAAATGCTGG ATACAAGGTTATTTCTGCGAACAATGGTATAGATGCGCTTAAAATAGCAAAGGCTGAAAATCCTAAATTAATATTATTAG ATTTAATGTTACCAGGATTAGATGGTTTTGATGTTTGTAAAGAAGTAAAGAAGAATAAGGAAACTCAAAATATATCTATA ATAATGTTGACAGCAAAAGGAGAGGAAATTGATAAAATATTAGGTTTAGAATTAGGTGCCGATGACTATATAACTAAACC ATTTTCTGTAAGAGAATTGCTAGCACGAGTTAAAGCGGTTCTTAGGAGGACTTATCCTGGTGTAGATATTGAAGAAAATT CATATGAGTCTCAAGGTCTTAAAATAGACTTTGATAGACATGAGGTTTTTATTAACAATCAAAAAATTGAGTTAACTTTA AAGGAATTTGATCTTTTAAAGATATTGATAAAAAATAAAGGAAAAATTCTTCAAAGAGAAACTCTATTAGATAAAATATG GGGATATGAATATATAGGTGAAACTAGAACTGTAGATGTACATATAAGATATTTGAGAAAGAAGATAGAAGAGGATGATA AAAATCCTAAATTTATAGAAACAATTAGAGGAGTAGGTTATAGATTTAACCCAATTGATAAATAA Protein sequence : MSDEKILIVDDEEHIIELLKFNLINAGYKVISANNGIDALKIAKAENPKLILLDLMLPGLDGFDVCKEVKKNKETQNISI IMLTAKGEEIDKILGLELGADDYITKPFSVRELLARVKAVLRRTYPGVDIEENSYESQGLKIDFDRHEVFINNQKIELTL KEFDLLKILIKNKGKILQRETLLDKIWGYEYIGETRTVDVHIRYLRKKIEEDDKNPKFIETIRGVGYRFNPIDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-21 | 42 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 7e-21 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | HE999704.1.gene2815. | Protein | 1e-41 | 51 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_012469.1.7686381. | Protein | 1e-39 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_002952.2859905.p0 | Protein | 5e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_002758.1121668.p0 | Protein | 3e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_009641.5332272.p0 | Protein | 3e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_013450.8614421.p0 | Protein | 3e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_007793.3914279.p0 | Protein | 3e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_002745.1124361.p0 | Protein | 3e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_009782.5559369.p0 | Protein | 3e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_002951.3237708.p0 | Protein | 3e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_007622.3794472.p0 | Protein | 5e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_003923.1003749.p0 | Protein | 3e-42 | 50 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_012469.1.7685629. | Protein | 4e-38 | 49 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | AE016830.1.gene1681. | Protein | 3e-39 | 47 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | DQ212986.1.gene4.p01 | Protein | 2e-29 | 46 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_002952.2859858.p0 | Protein | 3e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_007622.3794948.p0 | Protein | 3e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | AE015929.1.gene1106. | Protein | 1e-25 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_003923.1003417.p0 | Protein | 3e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_013450.8614146.p0 | Protein | 3e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_002951.3238224.p0 | Protein | 3e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_007793.3914065.p0 | Protein | 3e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_002758.1121390.p0 | Protein | 3e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_010079.5776364.p0 | Protein | 3e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_014475.1.orf0.gen | Protein | 2e-31 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_005054.2598277.p0 | Protein | 2e-31 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | AM180355.1.gene1830. | Protein | 7e-29 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | NC_002695.1.916589.p | Protein | 4e-26 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | CP001138.1.gene2239. | Protein | 7e-26 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | CP000034.1.gene2186. | Protein | 5e-26 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | BAC0596 | Protein | 7e-26 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | BAC0039 | Protein | 5e-26 | 44 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | FJ349556.1.orf0.gene | Protein | 4e-31 | 43 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | CP001918.1.gene3444. | Protein | 2e-24 | 43 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | CP000647.1.gene2531. | Protein | 5e-25 | 43 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | HE999704.1.gene1528. | Protein | 2e-24 | 42 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | AF130997.1.orf0.gene | Protein | 1e-25 | 42 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | EU250284.1.orf4.gene | Protein | 4e-26 | 42 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | CP004022.1.gene1676. | Protein | 2e-23 | 42 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | CP000034.1.gene3671. | Protein | 5e-32 | 42 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | AF155139.2.orf0.gene | Protein | 2e-31 | 41 |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | AE000516.2.gene3505. | Protein | 1e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLH_1146 | YP_001920540.1 | alkaline phosphatase synthesis transcriptional regulatory proteinphoP | VFG0596 | Protein | 5e-22 | 42 |
