Gene Information

Name : Nther_2628 (Nther_2628)
Accession : YP_001918771.1
Strain : Natranaerobius thermophilus JW/NM-WN-LF
Genome accession: NC_010718
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2824851 - 2825576 bp
Length : 726 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hau:Haur_2605 ABC transporter related

DNA sequence :
TTGAATTCTGCAACTGCTACTATAAATAATCAAAATGATAATAACACGATGATAGCTGCTCGAAATGTGATTAAGAAATA
TAGAATGGGCAATCAAATCGTTTCTGCCTTAAGCGGAGTCGACCTGGAGGTTGAACCCGGGGAAATTGTGGTTGTCCTCG
GTACTTCTGGTAGTGGGAAAACTACTTTATTGAACATTGCCGCTGGACTAGAGCGTCCCACTAAAGGTGAACTGTTTATC
GATAAGTATAAGCTTAACCAGTTATCAGAACGACAAATGACTCTTTTGCGTCGTCGATATATTGGATTTATCTTTCAGTT
GTATAATTTGGTACCCTCATTAACTGCCTTGGAAAATGCCGTGATGCCCTTAGTTTTTGAGGGAGTTTCACCGAAGGAGA
GGGAGAAGAGGGGGAAAACTTTTTTAAAGCAGCTAGGATTAGGAGACAGGCTGCTCCATCGCCCTGGAGAGTTGAGTGGT
GGACAGCGTCAGCGAGTAGCTATAGCAAGAGCTTTAATTAACAATCCAAGGGTGATTTTTGCCGATGAACCAACAGGTAA
CTTAGATACTAGGACAACAAAAGAAATATTAGCTTTATTATTAAATATAATTAGGGAAAATGGCCAGACCATGCTTATGG
TAACCCATGATACCGAAGTGGCAACCTATGGTGACAGGGTAGTGGAAATGGTAGATGGCTATATTACGGATATTTATAGT
AATTAG

Protein sequence :
MNSATATINNQNDNNTMIAARNVIKKYRMGNQIVSALSGVDLEVEPGEIVVVLGTSGSGKTTLLNIAAGLERPTKGELFI
DKYKLNQLSERQMTLLRRRYIGFIFQLYNLVPSLTALENAVMPLVFEGVSPKEREKRGKTFLKQLGLGDRLLHRPGELSG
GQRQRVAIARALINNPRVIFADEPTGNLDTRTTKEILALLLNIIRENGQTMLMVTHDTEVATYGDRVVEMVDGYITDIYS
N

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nther_2628 YP_001918771.1 ABC transporter NC_008702.1.4606598. Protein 7e-37 47
Nther_2628 YP_001918771.1 ABC transporter CP001581.1.gene598.p Protein 2e-41 45
Nther_2628 YP_001918771.1 ABC transporter NC_012469.1.7686878. Protein 2e-48 45
Nther_2628 YP_001918771.1 ABC transporter CP001581.1.gene798.p Protein 3e-39 41