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Name : Nther_2497 (Nther_2497) Accession : YP_001918648.1 Strain : Natranaerobius thermophilus JW/NM-WN-LF Genome accession: NC_010718 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2687985 - 2689826 bp Length : 1842 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dsy:DSY3347 hypothe DNA sequence : ATGACTGCAAAATACATAAAAAGAGGAATCCAGGTCCTAGTAGATATGTATCTGTTCAACCTGGCCTTTATCATGGCACT ATTGTTTAGATTCGATGGTTTTGTCCCGGAAGAATACTTGATTATGTATCAGGATAGTTTCTGGTGGATAACGGCAGTAT TCATTCTCACTTGTATAGTCTTTCGGCTGTATCACAGATTGTGGTCTTATGCCAGTATTCACGATGTGATAGTCCTGGGA ACAGCCATCACCATCGGTTCCATTTCCGTTTATGCAGCTACTGTTGCTTTAGACATGATGTTTCCCAGAAGCATTTATCT TATCTCCTTATTTTTGAACCTGGTATTTCTCGGAGGATATCGGCTGGGCTTTCGAGTCCTCAATATATATAAACGGTTTG GCTTGAGTCCTCTAAAAAAGCAAAAACCCAAAAATAGAAAAAACGTACTAATAGTAGGTGCTGGAGATGCCGGCAATATG GCTCTAAAGGAATTAAACCAACACCAGCTAGACCTCTCAGTAAATATTGTTGGTTTTTTGGATGATGACCAGGAAAAACA GGGTTGTCGTGTGAACGGAGTCAAAGTTCTAGGTTCTACCGATGAACTTGTTAAAATCTCCAAGAAAAAAGATGTAGACG AAGTTGTAATTGCCATGCCTTCAGCTCCTCAACAGGTGATTCGCTATCTCATAAAAACTTGTAGCGATTATTCTATTAAA ACTAAGATTATACCCGCTGTTCATGACTTAATTTCTGGTAGGGTTTCTATCAATCATTTAAGAGAAGTAGAAATCGAAGA CCTTTTGAAAAGGGATCCCATCGAACTGGATATAAATCAAATTGCCGGTTATTTAACTAATAAAGTGGTCTTGGTTACAG GGGCCGGAGGCTCCATCGGTTCGGAACTCGTCAGGCAGATTGCCAACTTTAATCCTCAAACTATATTACTTTTAGGACAC GGTGAAAACAGTATTTTCGAAATTTATAGAGAAATGGTAGAAAAATTTCCTAAAAATAGATTGGTACCCATCATTGCCGA TGTTAAAGACAGGGAAAAAATATTTCAAATCGCCAAAGATTACGAGCCCGATGTAGTATTTCACGCCGCCGCACATAAAC ACGTGCCATTAATGGAACAAAATCCAGAAGAAGCCATTAAAAACAATATCTACGGCACAAAAAACCTGGTAGATGCAGCT CATCACCATAAATCCCAGCGCTTTGTATTGGTTTCCACAGATAAAGCCGTTAACCCCACTAGTGTCATGGGAGCTACTAA ACGAGTTGCAGAACTAATCGTAGAAAACATGGCTCAAACAAGTGAAACCAAATATACAGCTGTCAGGTTTGGTAATGTCT TGGGAAGCAGAGGTAGTGTGATACCTCACTTTAAGGAACAGATCAGTAAAGGTGGGCCAGTCACAATTACCCACCCCGAA ATGACAAGATACTTCATGACAATTCCTGAAGCTTCCCAGTTAGTCATAGAGGCCGGAGGAATGAGTAAAGGCGGAGAGAT TTATGTACTAGATATGGGGCAACCGGTAAAAATTGTTGACCTGGCAAAAGATCTAATCAAATTGTCCGGGCTGGAGCCGG AAAAGGATATTAAATTAAGCTATACCGGAATAAGGCCTGGAGAAAAACTCTACGAAGAACTCCTGACAGAAAAGGAAAAT GTCTCCAAGACAAAACATGACAAAATTTACATCACTGACAATACGGTTTCCGATACAAATGAAATGAAAAAAGAACTACA TGCCATGGAGGAAATAATAGCTGCAGATTTAACTTTCTTAGAAAAACAGCTCCTACAAGAATCGAAAACTGGAACTGAAT AG Protein sequence : MTAKYIKRGIQVLVDMYLFNLAFIMALLFRFDGFVPEEYLIMYQDSFWWITAVFILTCIVFRLYHRLWSYASIHDVIVLG TAITIGSISVYAATVALDMMFPRSIYLISLFLNLVFLGGYRLGFRVLNIYKRFGLSPLKKQKPKNRKNVLIVGAGDAGNM ALKELNQHQLDLSVNIVGFLDDDQEKQGCRVNGVKVLGSTDELVKISKKKDVDEVVIAMPSAPQQVIRYLIKTCSDYSIK TKIIPAVHDLISGRVSINHLREVEIEDLLKRDPIELDINQIAGYLTNKVVLVTGAGGSIGSELVRQIANFNPQTILLLGH GENSIFEIYREMVEKFPKNRLVPIIADVKDREKIFQIAKDYEPDVVFHAAAHKHVPLMEQNPEEAIKNNIYGTKNLVDAA HHHKSQRFVLVSTDKAVNPTSVMGATKRVAELIVENMAQTSETKYTAVRFGNVLGSRGSVIPHFKEQISKGGPVTITHPE MTRYFMTIPEASQLVIEAGGMSKGGEIYVLDMGQPVKIVDLAKDLIKLSGLEPEKDIKLSYTGIRPGEKLYEELLTEKEN VSKTKHDKIYITDNTVSDTNEMKKELHAMEEIIAADLTFLEKQLLQESKTGTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-102 | 49 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-102 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nther_2497 | YP_001918648.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-109 | 47 |
