Gene Information

Name : Nther_2455 (Nther_2455)
Accession : YP_001918608.1
Strain : Natranaerobius thermophilus JW/NM-WN-LF
Genome accession: NC_010718
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.11
Position : 2637374 - 2638552 bp
Length : 1179 bp
Strand : -
Note : KEGG: sth:STH832 cystathionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGAAAGATTCAAAATTAACTACTCGTATTGTCCATGCCGATGAAGGTCAAAAGAACGAAGCGGGTGCTCTTAGGACCCC
AATTTATCAAAGTTCAACCTTTGTATTTGACAATGTTGAACAAGGAGCTGCTAGATTTGCCGGTGAAGAGGCTGGCTACA
TCTACACTAGATTGGGTAACCCAACTCAAAAAAATCTTGAAAAGCAGATGGCTAACCTAGAAGGTGGAGATGATGCTATA
GCATTAGGATCTGGTATGGCAGCTGTGTCTGCTGTTGTGATGAATTTATTAAATTGTGGAGATCATATGGTGGCCTCAGA
TACACTATATGGCTGTACTCACTCTCTGTTTGACGAGTTGTTACCCAACTGGGGCATTGAAGTAACTTTTGTTGATACCA
GTGAGCCTGAAAATATCCGAGCTGCTATTAAAGATAATACAAAGGTGATTTATACTGAAACTCCTGCGAATCCAACTATT
TCCATCACTGATCTGGAAGAAGTTGTGAAAATTGCAAAGGAAAAGGACGACATTACAACTGTAGTAGACAACACCTTTAT
GACTCCTTATCTTCAAAGACCGCTAGAAATGGGAATTGATATCGTAATTCATAGTGCTACCAAGTACCTTGGTGGTCACG
GAGATACTGTTGCCGGAATAGTAGTAGGTTTCGAGGAACTGATTGGTGATATAAAAATGACTACAGTAAAAGATTTAGGT
GGTATTATTGCACCTTTTGATGCTTTCCTATTGCTCAGAGGAATTAAAACTTTAGCTGTTCGTGTGGACAAGATCTGTGA
AAACGCTATGAAGGTAGCCAAGTTCTTAGAAGAACATCCAGCTGTAGAAAGAGTGTACTACCCAGGACTTGAAAGCCATC
CTCAACACGAGTTAGCTAAAAAACAAATGGAAGACTTTGGTGGCATTATTGCCTTTGAATTAAAAGGTGGCTTTGAAGCT
GGTAAAAACCTACTAAATAATGTAGAGTTGTGTACATTGGCTGTTAGCTTGGGAGATGTGGATACATTGATCCAGCATCC
AGCATCCATGACTCATTCTGTAGTTCCACAAGAAGAACGTGAAAAAGCAGGTATTACCGATGGTATGGTAAGGGTTTCCG
TAGGAATTGAAGATGTAGATGATATTATCGAAGACCTAAAACAAGGAATGGAACAGTAA

Protein sequence :
MKDSKLTTRIVHADEGQKNEAGALRTPIYQSSTFVFDNVEQGAARFAGEEAGYIYTRLGNPTQKNLEKQMANLEGGDDAI
ALGSGMAAVSAVVMNLLNCGDHMVASDTLYGCTHSLFDELLPNWGIEVTFVDTSEPENIRAAIKDNTKVIYTETPANPTI
SITDLEEVVKIAKEKDDITTVVDNTFMTPYLQRPLEMGIDIVIHSATKYLGGHGDTVAGIVVGFEELIGDIKMTTVKDLG
GIIAPFDAFLLLRGIKTLAVRVDKICENAMKVAKFLEEHPAVERVYYPGLESHPQHELAKKQMEDFGGIIAFELKGGFEA
GKNLLNNVELCTLAVSLGDVDTLIQHPASMTHSVVPQEEREKAGITDGMVRVSVGIEDVDDIIEDLKQGMEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-75 45
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-77 45
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-57 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nther_2455 YP_001918608.1 cystathionine gamma-synthase BAC0207 Protein 5e-88 51