Gene Information

Name : Nther_1731 (Nther_1731)
Accession : YP_001917893.1
Strain : Natranaerobius thermophilus JW/NM-WN-LF
Genome accession: NC_010718
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 1796968 - 1798653 bp
Length : 1686 bp
Strand : -
Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mta:Moth_1554 type II secretion system protein E

DNA sequence :
TTGATTGATTACAACATACTTTCAAAAGCTCAACTCAATGAAGCACTAATTGTTCAAAAGCGTACAGGTAACAGATTGAG
TTCGATAGTAATAGATTTACAATTTATAAGTGAGAATGCGTGGGTTCAATTGTTAGAAAAAAAATTAGGTTTACCGCGAA
TAGAATTGTCAGATTATTGTGTCGAAAATGATACTGCCTATATACTTCCCTTCCATATCGTTGAACAAAATCGAATATTT
CCATTTAAACTAAATCAGAATAATGTTGCTATAGCTACATCTGAACCATTGAATATTTTAATTATAGATGAAATTAAGTT
AATAACAGGTAAAGAAGTTGAAATATGGTTGGCTACTCCCGGAGAAATTGACAGAGAGATTAAAAGATTTTTTGATATCA
AAGAAGTGGTAGAAAAAGAAGTGCAGTTAATTTCCAAAGAATCTGTTACCAATATTATAGATAATAAAAACAGTGATCAA
AATTTAAATTTTGAAAATGAAGCTCCTGCTATAAAAATTATAGATACAGTAATAAAATTAGCCATTGATCAAGAAGCTAG
TGATATACATTTTGAACCAACTAGTAGTGACATGTTAGTTAGATTTAGAGTTGATGGGATGATGCGTCAAATAACCTGTT
TTCCCAAGCACACTCAAGAACTGTTGATATCACGGATAAAAATAATGACCAATATGGATATAACTGTGAAAAGATTACCG
CAAGATGGACGATGTGAATTTACAAGTCAAGAACAGAACATAGATTTAAGAGCATCAGCACTACCCACTATATTTGGTGA
AAAAATAGTGATCAGATTACTTTACAAAGAAAAAATTATTTTTCCTTTGGACAAACTTGGGTTTAAAGATAAAGAATTAA
GTCAATACAAGGCTATGTTGGCTGATAGTTCTGGCATGATATTAGTGACTGGACCTACGGGCTGTGGAAAGACAACGACT
TTATACTCATCACTTAGTTGGATAAATTCACCAGAAAAAAATATAATTACTGTGGAAGACCCTGTAGAATACCAACTACC
AGGTGTTAATCAAGTGGAAATGAATGAGAAAGCTGGATTAACCTTCGCAATTGGATTAAGGTCTATTCTACGGCAAGATC
CCGATATAATTATGATAGGTGAAATCAGAGATTTGGAAACGGCACGGATAGCAGTCAGATCCTCATTGACTGGTCATTTA
GTTTTTTCCACACTACACACTTCAAATTCAATAGGAGCTTTATCAAGATTAATTGATATGGGGATTCCCATGTATTTATT
GAACTCTTCTATTAAAGGTATTTTGTCTCAGAGATTGGTTAGGAAAATTTGTAATCATTGTAAAGAACTATATCAGCCTA
GTTTTCAAGAACTTAACTTTTATGAAGCTCATGCCAATCATATATCTTATTTACCTAATTTTTTTAGAGGCAGAGGTTGT
AGAATATGTAATGGAACAGGATATCAAGGGAGAAAGGCTGTATTTGAACTGCTAGTAGTAGACAATCAAATAAAAAAAGA
AATCGCGAAAGGGGTAACAAAACTAGATGACTTGAACTTCGCGTCAGTGTGGGATTGTTTAACACTAGTGAATAATGCTT
TACAGGATGTTAATAGTGGAATTACGACTTTAGAAGAAGTTATTAGAATAACAAGTTTCCAAGAATCCCTAAAAGTGAGG
AAATAA

Protein sequence :
MIDYNILSKAQLNEALIVQKRTGNRLSSIVIDLQFISENAWVQLLEKKLGLPRIELSDYCVENDTAYILPFHIVEQNRIF
PFKLNQNNVAIATSEPLNILIIDEIKLITGKEVEIWLATPGEIDREIKRFFDIKEVVEKEVQLISKESVTNIIDNKNSDQ
NLNFENEAPAIKIIDTVIKLAIDQEASDIHFEPTSSDMLVRFRVDGMMRQITCFPKHTQELLISRIKIMTNMDITVKRLP
QDGRCEFTSQEQNIDLRASALPTIFGEKIVIRLLYKEKIIFPLDKLGFKDKELSQYKAMLADSSGMILVTGPTGCGKTTT
LYSSLSWINSPEKNIITVEDPVEYQLPGVNQVEMNEKAGLTFAIGLRSILRQDPDIIMIGEIRDLETARIAVRSSLTGHL
VFSTLHTSNSIGALSRLIDMGIPMYLLNSSIKGILSQRLVRKICNHCKELYQPSFQELNFYEAHANHISYLPNFFRGRGC
RICNGTGYQGRKAVFELLVVDNQIKKEIAKGVTKLDDLNFASVWDCLTLVNNALQDVNSGITTLEEVIRITSFQESLKVR
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 7e-82 42
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-82 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nther_1731 YP_001917893.1 type II secretion system protein E VFG1876 Protein 7e-83 44
Nther_1731 YP_001917893.1 type II secretion system protein E VFG0182 Protein 5e-83 44
Nther_1731 YP_001917893.1 type II secretion system protein E VFG1880 Protein 3e-76 43
Nther_1731 YP_001917893.1 type II secretion system protein E VFG2048 Protein 9e-82 41