Gene Information

Name : Nther_1668 (Nther_1668)
Accession : YP_001917830.1
Strain : Natranaerobius thermophilus JW/NM-WN-LF
Genome accession: NC_010718
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1744767 - 1745654 bp
Length : 888 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase

DNA sequence :
ATGGAAAAAACCGTTCACGAATTTATCTATTATTTAAATGTTGAACGAGGTTTGTCAGAGAACACGCTAAACTCGTATTT
GCGCGATCTAAAAAACTTTTTAGAGTTCCTTAACCAACAAGGTGTAACAAAGTGGCAGGAAGTCAAACGTACTCATATTA
TGAAATATTTAATATTTATGAAAGAAAAGGGTAAAGCTTCGGCCACCGTAACTAGAAACATAGCCTCTGTCCGGTCTTTC
TTTCAGTTTTTACTTCAGGAAGGCATGATTTCAGAGAATCCATCAACTGATTTAGAAACTCCCAAACAAGAAAAAAAATT
GCCTGAAATTTTATCACCACAGGAAGTGGACAAACTTTTAAACCAACCGGATACTACCGATTTCAAAGGTAAAAGAGATA
AGGCAATGCTTGAGGTTTTGTATGCAACAGGCATGAGAGTTAGTGAATTAATATCATTGAATGTTGAGCATGTTGATAGT
AACAATGGGTACATACTATGTAAAGGGAAAGGCGATAAGGAAAGAATTGTTCCTCTAGGTAAAATGGCAATAAAAAGTGT
TTCTGATTACATATCAAAAAGCCGACCCCAGTTAAGAAAGAACTTATCTGAACCAGCGTTATTTTTAAATCATCATGGGA
AAAGATTATCTCGACAAGGCTTTTGGAAAATATTAAAAAAATATGCTGAAAAAATTGGGATTAAACAAAAAATCACACCT
CATACACTTAGACATTCATTTGCCACACATTTACTTGAAAATGGAGCTGATTTAAGAGCAGTTCAAGAAATGTTGGGACA
TTCAGATATTTCTACTACACAGATATATACTCACTTAACAAAACAACGCCTAAAGGACGTTTATTCAAAATCTCATCCCA
GGGCTTAA

Protein sequence :
MEKTVHEFIYYLNVERGLSENTLNSYLRDLKNFLEFLNQQGVTKWQEVKRTHIMKYLIFMKEKGKASATVTRNIASVRSF
FQFLLQEGMISENPSTDLETPKQEKKLPEILSPQEVDKLLNQPDTTDFKGKRDKAMLEVLYATGMRVSELISLNVEHVDS
NNGYILCKGKGDKERIVPLGKMAIKSVSDYISKSRPQLRKNLSEPALFLNHHGKRLSRQGFWKILKKYAEKIGIKQKITP
HTLRHSFATHLLENGADLRAVQEMLGHSDISTTQIYTHLTKQRLKDVYSKSHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-55 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-55 43