Gene Information

Name : Nther_0012 (Nther_0012)
Accession : YP_001916199.1
Strain : Natranaerobius thermophilus JW/NM-WN-LF
Genome accession: NC_010718
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 21504 - 22391 bp
Length : 888 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGAATATAGAAAAAGGTACAGAAACAGTAAAAAAAGGTATGGCCCAAATGCAAAAAGGCGGAGTTATCATGGATGTTAC
AACTCCCGAACAGGCTAAAATAGCTGAAAAAGCAGGAGCTGTAGCAGTGATGGCTTTAGAAAAAGTGCCTGCAGATATAA
GAGCTGGTGGTGGAGTAGCACGAATGGCAGATCCTGAGGTTATTAAAAAGATCATGGATGCTGTAAGTATCCCAGTTATG
GCCAAGGCACGAATTGGTCATTTTGTGGAAGCTCGTATTTTGGAAAATTTAGGCGTTGATTATATAGACGAAAGTGAAGT
GCTTACCCCAGCCGATGAATATTATCACATTGATAAAAACAAATTCACTGTCCCTTTTGTATGTGGTGCTAGGAATTTAG
GAGAAGCCTTACGCCGTGTTGGAGAAGGCGCTTCTATGATGAGAACTAAAGGGGAAGCAGGAACGGGTAATGTGGTAGAG
GCTGTACGTCATATAAGAACTGTTATGGATGGTATCAGAAAAGTTCAAAATCTTCCTGATGATGAGTTAATGACTGAAGC
TAAGAATATTGGAGCACCTTATGACCTTATTAAACAAGTTAAAGAAGAGGGAAGATTGCCTGTAGTTAACTTCGCTGCTG
GTGGAGTAGCTACACCTGCCGATGCAGCTTTGATGATGCAATTAGGTGCCGATGGAGTTTTTGTAGGTTCAGGTATATTT
AAATCAGGTGATCCTGAAAAAAGAGCAAAATCTATTGTAGAAGCAACATTAAATTACGATAATTATGATGTGTTGGCTGA
TGTTTCTTCAGGATTGGGTGAAGCGATGGTAGGAATTAATGTATCCGATCTGGAAGAACAGGAAAGGATGCAAAATCGAG
GCTGGTAA

Protein sequence :
MNIEKGTETVKKGMAQMQKGGVIMDVTTPEQAKIAEKAGAVAVMALEKVPADIRAGGGVARMADPEVIKKIMDAVSIPVM
AKARIGHFVEARILENLGVDYIDESEVLTPADEYYHIDKNKFTVPFVCGARNLGEALRRVGEGASMMRTKGEAGTGNVVE
AVRHIRTVMDGIRKVQNLPDDELMTEAKNIGAPYDLIKQVKEEGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIF
KSGDPEKRAKSIVEATLNYDNYDVLADVSSGLGEAMVGINVSDLEEQERMQNRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-87 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-87 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-87 67