Gene Information

Name : Nther_0117 (Nther_0117)
Accession : YP_001916304.1
Strain : Natranaerobius thermophilus JW/NM-WN-LF
Genome accession: NC_010718
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 134047 - 135516 bp
Length : 1470 bp
Strand : +
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: drm:Dred_0175 lysyl-tRNA synthetase

DNA sequence :
ATGGAGAAAGATCATGAATTGATCAATGTCAGGTACGAAAAAGCCCGCGACATGGAAAATCGCAACATCCAACCTTTTGG
CGACAAATATTCTGCCACTTACTATGCTCAAGAAGTTAAAGATAACTATGAACAATTGTTAGAAACTAAAGAAGAAGTTA
GCTTATCAGGACGTATTATGGCCAAGCGAGGCCATGGCAAAGCAGGATTTGCCCATATCCAAGACTCTAGTGGACAAGTG
CAGATTTATACACGAGTTGATAATGTTGGGGAAGAAGACTACGAATTGTATAAAGAACTGGATATTGGAGATATTATTGC
TTTAAAAGGGCCAGTTTTTATGACTAGAAAAGGTGAAATTACTGTTGAGGTCAAAGAATTTCACCTCCAAAGTAAGTCTT
TACGTCCTCTACCTGAAAAATGGCATGGATTGAAAGATGTAGACCTGCGCTACCGTAAACGATACTTAGATCTGATCATG
AATCAAGATGTTAAAGATACTTTTGTAATTAGAAGTAAGATAATCCGAGAAATGCGAAGATATTTGGATGATAGAGGTTT
TTTTGAAATGGAAACCCCCACCCTACATACAATTCCAGGTGGTGCAAATGCTAGACCATTTAAAACATATCACAACGCTT
TAGAAATGAAACTTTATATGAGAATAGCAACTGAATTACACTTGAAGAGGCTAATTGTTGGTGGATTTGATAAAGTTTAC
GAATTAGGTAGAATTTTTAGGAATGAAGGAATATCAACTAAACATAATCCTGAATTTACCTCAATTGAACTATATCAATC
TAATAGTGATTACCATGACATGATGGAGCTTACTGAAAATATGATTTATGAAATCGCAAACAAAATTTTTGGAACCCCAG
TGGTTGAATATCAGGGGACAAATATTGACTTCACTCCACCATGGCCTAGAAAAACAATGATTGATGCCGTGAAAGAGGCT
ACAGGAATTGATTTTTCCGAGCTAAATCATGAAAAAGCCAGAGAAAAAGCCGAACAAGCGGGAATAGAAGTCGAGAAAGA
TGCCACATGGGGTGAAGCCTTAAACGAAATTTTTGAGGAAAAGGTAGAAGATAGTTTGGTTCAACCCACCTTCATTCTAG
ACTATCCTGTTGAAGTTTCACCTTTGGCAAAAAGGCATGAAGAAGATAGTCGCTTAACTTACAGATTTGAAGGATTCCTG
TGGGGAAGTGAAATAGCAAATGCTTTTACAGAACTTAATGACCCTAGAGATCAAAGGGAACGATTTGAAAGTCAAGTGGA
AAAACGTGATGCGGGTGACGAGGAAGCTCATATGATGGATGAAGATTTTGTTGAAGCTTTAGAATATGGTATGCCTCCCA
CAGGTGGCCTTGGGATTGGAATAGATAGATTAGTAATGTTTATGACAAACTCTACATCTATAAGAGATGTAATTTTATTC
CCTACAATGAGGCCAAAGCAGGATGAATAA

Protein sequence :
MEKDHELINVRYEKARDMENRNIQPFGDKYSATYYAQEVKDNYEQLLETKEEVSLSGRIMAKRGHGKAGFAHIQDSSGQV
QIYTRVDNVGEEDYELYKELDIGDIIALKGPVFMTRKGEITVEVKEFHLQSKSLRPLPEKWHGLKDVDLRYRKRYLDLIM
NQDVKDTFVIRSKIIREMRRYLDDRGFFEMETPTLHTIPGGANARPFKTYHNALEMKLYMRIATELHLKRLIVGGFDKVY
ELGRIFRNEGISTKHNPEFTSIELYQSNSDYHDMMELTENMIYEIANKIFGTPVVEYQGTNIDFTPPWPRKTMIDAVKEA
TGIDFSELNHEKAREKAEQAGIEVEKDATWGEALNEIFEEKVEDSLVQPTFILDYPVEVSPLAKRHEEDSRLTYRFEGFL
WGSEIANAFTELNDPRDQRERFESQVEKRDAGDEEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVMFMTNSTSIRDVILF
PTMRPKQDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 7e-111 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nther_0117 YP_001916304.1 lysyl-tRNA synthetase VFG1668 Protein 4e-111 48