Gene Information

Name : PXO_04439 (PXO_04439)
Accession : YP_001912152.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Unknown
Product : ISXoo6 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 994461 - 995423 bp
Length : 963 bp
Strand : -
Note : -

DNA sequence :
ATGCAACTGACCTTCGGAGACGCGGAGTACAACGGCAAGCGCAAGCGGACGCGGCGTGAGGTGTTCCTGGCCGAGATGGA
TCAGGTCGTGCCATGGAAGGGCCTGCTGGCGCTGATCGAGCCGCACTATCCAAAGTCGGGGCAGCCGGGGCGACAGCCGT
ATCGGCTGGAGACGATGCTGCGCATCCACTTTTTGCAGCAGTGGTATGCACTGAGCGATCCCTCGGCGGAAGAAGCCCTA
TACGACACGGTGTCGATGCGCCGTTTCGCCAAGATCGGTGGGCTGGACGAGGTGCCGGATGAAACGACGATTCTCCACTT
CCGGCATCTGCTAGAGCGGCATGATCTGGCGCGCAACCTGTTCAACCGGGTCAACGCGCACCTGTCGCGCAAGGGGCAGA
GTCTGCGGGGCGGGACGATCGTGGATGCCACGATCATTGCGGCGCCCAGTTCGACCAAGAACAAGGATGGCGAGCGCGAT
CCGGACATGCACCAGACCAAGAAAAGGAATCAGTATGACTTCGGGATGAAGGCGCACATCGGGGTGGACGATGACTCCGG
GCTGGTGCACCACGTCGAATGCACAGCGGCCAACGTGGCCGATATCACGCAAGCGCACAAGCTGCTGCACGGCAAGGAGG
ATACGGTGTGCGGGGACAGCGGCTACACCGGGCTTGAGAAGCGCGAGGAGATGAAGCGCAAGCGCACGCTGCGCTACCTG
ATCGCGGAGAAGCCCTCGAAGCTGAAGCAGATCAAGAACAAACGCGAACTGAAGTTGGCCAAGCGGTGGGAGCACACCAA
GGCCAGCCTGCGGGCGAAGGTGGAACACCCGTTCCGGGTGATCAAGCGTCAGTTTGGCTACGTCAAGGTGCGCTATCGCG
GCCTGGTCAAGAACACCGCGCAGATGCTGACGCTGTTTGCGCTGTCGAATCTGTGGCTGAAGCGCAAAGAGTTACCTGAT
TAG

Protein sequence :
MQLTFGDAEYNGKRKRTRREVFLAEMDQVVPWKGLLALIEPHYPKSGQPGRQPYRLETMLRIHFLQQWYALSDPSAEEAL
YDTVSMRRFAKIGGLDEVPDETTILHFRHLLERHDLARNLFNRVNAHLSRKGQSLRGGTIVDATIIAAPSSTKNKDGERD
PDMHQTKKRNQYDFGMKAHIGVDDDSGLVHHVECTAANVADITQAHKLLHGKEDTVCGDSGYTGLEKREEMKRKRTLRYL
IAEKPSKLKQIKNKRELKLAKRWEHTKASLRAKVEHPFRVIKRQFGYVKVRYRGLVKNTAQMLTLFALSNLWLKRKELPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 3e-95 63
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 6e-70 60
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 4e-70 60
unnamed AAO33449.1 putative transposase Not tested Not named Protein 6e-57 54
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 6e-57 46
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 6e-57 46