|
Name : PXO_03397 (PXO_03397) Accession : YP_001911283.1 Strain : Xanthomonas oryzae PXO99A Genome accession: NC_010717 Putative virulence/resistance : Virulence Product : type III secretion system protein HrpB Function : - COG functional category : N : Cell motility COG ID : COG1317 EC number : - Position : 76919 - 77620 bp Length : 702 bp Strand : + Note : - DNA sequence : ATGCGTGTCTGGTTGAGGTCAACGCCCGACGCGATCGGTCTGGATTGCGATGTCGTTCCGCGCGAGGCGCTGGCCTCGGT GTTGGCGCTGGATGCTGCCGCTGTCGAAGTGCACGCACGCTGCGAGCAGGCCCTGAGCCAGGCGCAGGCACGTGCACAGA CGCTGATCGAAGAGGCCCAGCAGCAGGCCGAGGCGATCCTGCACGATGCGCGCCAAAAGGCCGAGCGCAGCGCACGCCTA GGATATGCAGCCGGCCTGCGACGTCAGCTTGATGAGTGGAACGAATCCGGCCTGCGTCATGCCTTTGCCGCCGAAACGGC AGCGCACCGGGCACGTGAGCGCCTGGCTGAGATTGTGGCGCGCACCTGCGAGCACGTCATCCTCGGACACGATCCCGCGG CGCTGTATGCGCGTGCGGCGCAGGCCTTGGAAGGTGCCCTGGACGAGGCCAAAGCCTTGCGCGTGAGCGTGCACCCCGAG GCGCTGGACGCTGCGCGGCGCGCCTTCGACGCGGCCGCCACCAAGGCGGGCTGGACCCTGCAGGTAGAGCTGTGCGGCGA TGCCGATCTGGCCGTGGGCGCCTGCGTGTGCGAATGGGATACGGGCGTGTTCGAGACCGATCTGCGCGATCAGCTGCGCA GTCTGCGGCGCGTCATCCGCCGCGTGTTGGCCGCACCCCAGGAGCCCGCGGATGTTGGCTGA Protein sequence : MRVWLRSTPDAIGLDCDVVPREALASVLALDAAAVEVHARCEQALSQAQARAQTLIEEAQQQAEAILHDARQKAERSARL GYAAGLRRQLDEWNESGLRHAFAAETAAHRARERLAEIVARTCEHVILGHDPAALYARAAQALEGALDEAKALRVSVHPE ALDAARRAFDAAATKAGWTLQVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPADVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB5 | BAB07853.1 | HrpB5 | Virulence | Hrp PAI | Protein | 9e-56 | 100 |
| hrpB5 | AAF61282.1 | HrpB5 | Virulence | Hrp PAI | Protein | 9e-56 | 100 |
| hrpB5 | YP_198729.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 1e-55 | 100 |
| hrpB5 | AAP34340.1 | HrpB5 | Virulence | Hrp PAI | Protein | 2e-55 | 94 |
| hrpB5 | NP_640766.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 3e-55 | 94 |
| hrpB5 | AAB08460.1 | HrpB5 | Virulence | Hrp PAI | Protein | 2e-53 | 93 |
| hrcL | YP_362162.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 2e-53 | 93 |
| XC_3007 | YP_244075.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 4e-42 | 77 |
| hrpB5 | NP_636609.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 3e-42 | 77 |
