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Name : hrcU (PXO_03402) Accession : YP_001911278.1 Strain : Xanthomonas oryzae PXO99A Genome accession: NC_010717 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 73359 - 74438 bp Length : 1080 bp Strand : - Note : - DNA sequence : ATGTCGGAAGAAAAAACCGAGAAGCCGACCGAGAAGAAACTGCGGGATGCGCGCAAGGACGGGGAAGTTCCGGTCAGCCC GGACGTCACTGCAGCCGCGGTGCTCTTCGGCGCGTTATTGGTGATGAAATCGGCCGGCGATTACTTCGTCGATCACATGC GCGCATTGACGAGGATCGGCTTCGATTTTTCGGAAAACACACGCGATGCAACGGCGATAAACCGTGCACTCGCCCATATC GGCATCCAGGGATTGCTGTTGATGCTGCCGTTCCTGGCTGCGTGCCTGGTGGCTGGCTTGGTAGGCGGTGCGTTTCAGAC GGGCCTGAACGCCTCGCTCAAGCCGGTGTCGCCCAAGTTCGATTCGCTCAATCCCGCAAACGGGGTCAAGAAACTTTTTT CGTTGAGAAGTCTCATCAATCTACTGAAGTTGATCATCAAGGCCATCCTGATTGGCGTGGTGCTGTGGGTCGGTATCCGC ACCCTCATGCCGATGATCATTGGGCTTGCCTACGAGACACCGCTTGACATTTCCCAAATTGCCTGGCGAACCCTGAGCAT GCTCTTCGCACTGGGCGTGCTGCTGTTCATACTGGTCGGCGCTGCAGACTGGAGCGTGCAGCACTGGCTGTTCATCCGCG ACAAGCGAATGAGCAAGGACGAGCAGAAGCGCGAATACAAGGAAAGCGAGGGCGACCCCGAAATCAAGGGCAAACGCAAG GAATTCGCCAAGGAACTGGTCTTCGGCGACCCCCGCCAACGCGTCGCCAAGGCCAAGGTGATGGTGGTCAACCCGACCCA TTACGCGGTGGCATTGGCCTACGAGCCCGATGACTTCGGCTTGCCGCAGGTCGTTGCCAAGGGCGTAGACGATGGCGCGC TGGAACTGCGCGCCTTTGCGCATAACCAGGGCATTCCGATCGTTGCCAATCCGCCACTGGCACGTGCGCTGTATCAGGTG GAATTGGGCGACGCAATCCCCGAGCAATTGTTCGAAACGGTTGCGGTGGTGTTGCGCTGGGTCGATGGACTCGGTCGCGA CCACGGCGACGGCGACGGCAATGGAGCCCTGCCATGCTAG Protein sequence : MSEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFVDHMRALTRIGFDFSENTRDATAINRALAHI GIQGLLLMLPFLAACLVAGLVGGAFQTGLNASLKPVSPKFDSLNPANGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIR TLMPMIIGLAYETPLDISQIAWRTLSMLFALGVLLFILVGAADWSVQHWLFIRDKRMSKDEQKREYKESEGDPEIKGKRK EFAKELVFGDPRQRVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALYQV ELGDAIPEQLFETVAVVLRWVDGLGRDHGDGDGNGALPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-129 | 100 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 2e-128 | 99 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-121 | 94 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 2e-121 | 93 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-120 | 92 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-105 | 83 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-105 | 83 |
