|
Name : hrpD1 (PXO_03405) Accession : YP_001911275.1 Strain : Xanthomonas oryzae PXO99A Genome accession: NC_010717 Putative virulence/resistance : Virulence Product : type III secretion apparatus protein, YscQ/HrcQ family Function : - COG functional category : N : Cell motility COG ID : COG1886 EC number : - Position : 69741 - 70562 bp Length : 822 bp Strand : - Note : - DNA sequence : GTGGATACCGGCCAGATGGATTTGCGGATTGCTGCGCGCGACGGCCTGGCGCTGTTATTGAACGAGGACGACGACGCACT ACGCGTTTCGATCGCGGGAATGTTACTGGCCGATCATCTGGGCGCGTTTGCGCCGCTCGGCCTGGCTGCTGCCGAGGTGA TCGCCTTCAAGCGCGATGCAACGCCAGACGACTGCCACGGCATCGGTATGACACTGGGCGATCTCGATGCAATTGCGCTG AAGGCGAGCGCGTCGCTGCTGGACACGCTGCAGGCCGCAGTTGACGGACTTGCGGCGCCCGCGCAGCTGCCAGCCTGGCT GGCTGCACTGCGCGTCAACACGCGCCTGCGCATCGGCGGGCGCACCGCATCAGCTGCATTGCTGCAATCGCTGCGACCTG GCGATGTCTTGCTGCATTGCACGGCTGCGGCTGCGCTCACCAGCGGCGAAGTGCTTTGGGGGATCGCTGGAGGCGCGGTA TTGCGTGCGGCGGTGCGCTTGAACATGCAACAGATGATTCTGGAGGCCAGCCCCACAATGCAGCACGATACGTTTGAGCC TGAAGTCGCGCCGTCCACCAGCAACGTGGCGGAACTGGAACTGCCGGTGCAACTGGAAGTGGATCAACTTGCGCTGTCTC TATCGACCTTGTCGGGTTTACAGCCCGGGCAGATCCTGGAGTTGTCGGTGCCGGTCGATCAAGCCGACATCCGTCTGGTC GTTTACGGCCAGACCATCGGCACCGGCAGGTTGCTGGCAGTGGGCGAACATCTTGGTGTGCAGATCCTCAGCATGTCGGA GAGCACGCATGCAGATGCCTGA Protein sequence : MDTGQMDLRIAARDGLALLLNEDDDALRVSIAGMLLADHLGAFAPLGLAAAEVIAFKRDATPDDCHGIGMTLGDLDAIAL KASASLLDTLQAAVDGLAAPAQLPAWLAALRVNTRLRIGGRTASAALLQSLRPGDVLLHCTAAAALTSGEVLWGIAGGAV LRAAVRLNMQQMILEASPTMQHDTFEPEVAPSTSNVAELELPVQLEVDQLALSLSTLSGLQPGQILELSVPVDQADIRLV VYGQTIGTGRLLAVGEHLGVQILSMSESTHADA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcQ | BAB07861.1 | HrcQ | Virulence | Hrp PAI | Protein | 2e-95 | 99 |
| hrcQ | YP_198721.1 | hypothetical protein | Virulence | Hrp PAI | Protein | 1e-95 | 99 |
| hrcQ | AAD21320.1 | HrcQ | Virulence | Hrp PAI | Protein | 3e-90 | 94 |
| hrcQ | YP_362154.1 | HrcQ protein | Virulence | Hrp PAI | Protein | 4e-91 | 93 |
| hrcQ | NP_640758.1 | HrcQ protein | Virulence | Hrp PAI | Protein | 3e-85 | 90 |
| hrcQ | AAP34348.1 | HrcQ | Virulence | Hrp PAI | Protein | 5e-85 | 90 |
| XC_3015 | YP_244083.1 | HrcQ protein | Virulence | Hrp PAI | Protein | 1e-66 | 74 |
| hrcQ | NP_636601.1 | HrcQ protein | Virulence | Hrp PAI | Protein | 1e-66 | 74 |
