Gene Information

Name : PXO_03409 (PXO_03409)
Accession : YP_001911271.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Virulence
Product : protein HrpD5
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 67086 - 67844 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
TTGCCAGAAACGTCCTTCGTTGCGTTTCAGCCAGTGCGCTTCGGCCCGTTGGTGCTATGTGTTGGCGATGCTGGTGCCGA
TTGGCCGGACGATGTGGCGTTGCTGGAGCGGCTGCTTTCCCCAGCACCGCCACCAGCGCCGCGCACGTCCAGGCGCAACA
TCGTGCGTACTGCGGTGGGCGCCGTGCTAGCACTTGCAGCCGCGGCGTTGCTCCCCTCGTTGCAGCCCGCGTTTCTGTCC
GATGCTGCCGCCCGGCAACATCCGGAAACTGCCGTCAATCAGGCCAAAGGTTTATTGAAGCAGCTGGGCTTTCGCGAAGC
GCATGTTGCACAGGTCGGCACGCGCGTGCTGATCGAAGGCCTGGTGCCAAGCAGCGCCGATGCTGCACGCTTGCGTGCGC
AGGTGCGTCGCTATCACCCGGGCGTTGCCGTCAACGTGGCCGTGGTGGACGAGGTGGTGGCGACGCTGCGCGACACCCTG
GCTGACCCCGCCCTCAGCGTACGTTACGAGGGCAATGGCGTTTTCTCGGTTTCCGGCAGCAGCGACTACGCAGAACGTGC
AAGCCGCCGGATTGCCGACGTCCGCAGCGACCTGGGCCCCGAGGTCCGCGCGCTGCACGTGGAGATCAGCCAGCAAGACC
CGTCCATAAAAACACCGGATAATTACGACGCGGCATTGCTCGCCGATGACCTGCACTATGTCGAAACGCCGGATGGTACC
AAGCACATGACATCCCTGCCGCAGCAAGCGGCGCAATGA

Protein sequence : 
MPETSFVAFQPVRFGPLVLCVGDAGADWPDDVALLERLLSPAPPPAPRTSRRNIVRTAVGAVLALAAAALLPSLQPAFLS
DAAARQHPETAVNQAKGLLKQLGFREAHVAQVGTRVLIEGLVPSSADAARLRAQVRRYHPGVAVNVAVVDEVVATLRDTL
ADPALSVRYEGNGVFSVSGSSDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADDLHYVETPDGT
KHMTSLPQQAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpD5 YP_198717.1 protein HrpD5 Virulence Hrp PAI Protein 2e-75 99
hrpD5 BAB07865.1 HrpD5 Virulence Hrp PAI Protein 2e-75 99
hrcD YP_362150.1 HrcD protein Virulence Hrp PAI Protein 3e-70 93
hrpD5 AAD21325.1 HrpD5 Virulence Hrp PAI Protein 2e-70 93
hrpD5 NP_640754.1 HrpD5 protein Virulence Hrp PAI Protein 5e-69 88
unnamed AAP34352.1 HrpD5 Not tested Hrp PAI Protein 3e-69 88
XC_3019 YP_244087.1 HrpD5 protein Virulence Hrp PAI Protein 5e-52 71
hrpD5 NP_636597.1 HrpD5 protein Virulence Hrp PAI Protein 5e-52 71