Gene Information

Name : PXO_02990 (PXO_02990)
Accession : YP_001915758.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Unknown
Product : ISxac3 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4792860 - 4793639 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence :
GTGTTGCGGGTGAACCGGGCCGGTTACTACGCTTGGCTAAAGTCGCCCAAGAGTGAGCGCACCAAGGAAGACGAACGCCT
GCTGGGGTTAATCAAGCACCAATGGCTGGCCAGTGGCAGTGTCTATGGGCATCGCAAGATCACCAAGGATCTGCGCGATC
TGGCGGAGCGTTGCAGTCGCCATCGGGTGCATCGGTTGATGCGTGCGGAAGGGTTACGTGCGCAGGTGGGCTATGGGCGC
AAACCCTGCTTCCATGGCGGGACCGAGTGCGCCGCCGCAGCCAACCGGCTTGATCGGCAGTTCGATGTAACTGAGCCGGA
CACGACGCATGAAGGCTGGATGTATCTGGCTGTGGTGATCGATCTGTTCTCCAGGCAGGTCGTCGGCTGGGCGATGCGCG
ATCGGGCCGATACCGAGTTGGTCGTGCAGGCCCTGCTATCGGCAGTGTGGCGGCGCAAACCCGCATCTGGTTGCCTGATT
CACTCGGACCAAGGATCGGTCTACACCAGCGATGACTGGCAGAGTTTCCTGGCATCTCATGGCTTGGTGTGCAGCATGAG
TCGGCGCGGTAACTGCCATGACAACGCCCCGGTGGAGAGCTTCTTCGGCCTGCTCAAACGCGAGCGGATCAGGCGGCGGG
TCTACCCCACCAAGGACGCCGCGCGCGCCGAGGTGTTCGACTACATCGAGATGTTCTACAACCCAAAACGCCGTCATGGT
TCAATCGGCGACCTGGCCCCTGTAGAGTTTGAGCGGCGCTACGCGCAACGAGGGTCTTGA

Protein sequence :
MLRVNRAGYYAWLKSPKSERTKEDERLLGLIKHQWLASGSVYGHRKITKDLRDLAERCSRHRVHRLMRAEGLRAQVGYGR
KPCFHGGTECAAAANRLDRQFDVTEPDTTHEGWMYLAVVIDLFSRQVVGWAMRDRADTELVVQALLSAVWRRKPASGCLI
HSDQGSVYTSDDWQSFLASHGLVCSMSRRGNCHDNAPVESFFGLLKRERIRRRVYPTKDAARAEVFDYIEMFYNPKRRHG
SIGDLAPVEFERRYAQRGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 1e-34 42
tnpB CAB61574.1 transposase B Not tested HPI Protein 7e-35 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 4e-23 41
unnamed AAC31485.1 L0006 Not tested LEE Protein 3e-23 41
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 5e-24 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 4e-23 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-23 41
unnamed CAI43898.1 putative transposase Not tested LEE Protein 5e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PXO_02990 YP_001915758.1 ISxac3 transposase VFG0785 Protein 2e-23 41