Gene Information

Name : alr (PXO_03074)
Accession : YP_001915676.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : -
Position : 4717437 - 4718537 bp
Length : 1101 bp
Strand : -
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence :
GTGCGTCCTGCGCAAGCGTCGATCGATCTGGAGGCGTTGCGCCACAACTACCGCCTGGCCAAGCGCCTGGGTGGCAGCAA
GGCGCTGGCGGTGGTCAAGGCCGATGCTTACGGGCATGGCGCAGTGCGTTGCGCGCAGGCGCTGGAACCGGAGGCCGATG
GCTTCGCGGTGGCCTGCATCGAAGAGGCGCTGGAACTGCGCCAGGCCGGCATCCGCGCGCCAATCCTGTTGCTGGAAGGG
TTCTTCGAGCACGACGAGCTGCGCCTGATCGCCGAGCACGACCTGTGGACGGTGGCGGCTACGCCGCAACAGGTGCGCGC
GCTGGCCGCGTTCCAGAGCCCACGACCGTTGCGGGTGTGGTTGAAGATGGATAGCGGCATGCATCGGCTGGGCCTGTCGC
CGGAAGACTTCCGCGCCGCATGGCTGCGCCTGTGCGGGCTGCCGCAGATCGCCTCGCTGGTGCTGATGACCCACCTGGCG
CGCGCCGACGAATTGGACTGCAGCCGCACCGACGAACAGGCGGTGGCCTTTGCGCTGAGCGCCGGCGGCATGCGCGCGGA
AACCAGTCTGCGCAATTCGCCCGGCCTGCTCGGCTGGCCGGCGCTGCGCAACGACTGGTCGCGCCCGGGGCTGATGTTGT
ACGGCGCCAACCCGTTCCCGCAGGACACCGAGAACACTGCGCAATTGCGCCCGGTGATGACGCTGCGCTCGCGCATCATT
TTGGTCCGCGACCTGCCGGTCGGCGAACCGGTGGGCTATGGTGCCCGTTTTGTCGCCGAACGACCGACCCGCGTCGGCGT
GGTGGCGATGGGCTATGCCGACGGCTACCCGCAGTTCGCGCCGAACGGCACCCCGGTGCTGGTGGATGGCCAGGTCTGCC
CATTGATCGGTCGCGTCTCGATGGACATGCTCACCGTGGACCTTACCGACCACCCGCAGGCCGCCATTGGTGCCACCGTG
CAGCTGTGGGGCCAGGCACCACGCGTTGGCCCACTGGCCACGCAATGCAATGTCAGCGCGTATCAGCTGTTGTGTGGACT
CAAGCGCGTGCCGCGGACGTATGTGGGTAGTGCGGCAGTGGGCGAGGTTGCAGCGCGGTAA

Protein sequence :
MRPAQASIDLEALRHNYRLAKRLGGSKALAVVKADAYGHGAVRCAQALEPEADGFAVACIEEALELRQAGIRAPILLLEG
FFEHDELRLIAEHDLWTVAATPQQVRALAAFQSPRPLRVWLKMDSGMHRLGLSPEDFRAAWLRLCGLPQIASLVLMTHLA
RADELDCSRTDEQAVAFALSAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQDTENTAQLRPVMTLRSRII
LVRDLPVGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPNGTPVLVDGQVCPLIGRVSMDMLTVDLTDHPQAAIGATV
QLWGQAPRVGPLATQCNVSAYQLLCGLKRVPRTYVGSAAVGEVAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 2e-59 44