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Name : thiC (PXO_02603) Accession : YP_001915417.1 Strain : Xanthomonas oryzae PXO99A Genome accession: NC_010717 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4452181 - 4454058 bp Length : 1878 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATGCCGCGCCTACCGTTTTGCAGCAACAAGCCCAGTCGTTGTCCGAGGCTGTCACCCAACCGATTCCCGGTTCACG CAAGATCTTCGTGCAAGGCTCGCGCGCGGATCTGCAGGTGCCGATGCGCGAGATCGCGTTGACGCGCACGCCCACCTTGT TCGGTGGCGAAGAGAATCCGCCGCTCAGCGTCTACGACACTTCCGGGCCTTATACAGATCCGCAGGTGGCTATCGATCTG GCCGTTGGTCTGGCACCGCTGCGCGCGCACTGGATTGCCGAGCGCGGCGACACCGTCGCACTGGATGGGCTGAGCTCCAG TTTCGGGCGTGGCCGCGAGCACGATGCGCGTCTGGATGCCGTGCGCTTTCCGGCGCGGCGCTTGCCGCGGGTCGCGCGCG AGGGCGCCAACGTCACCCAGATGCATTACGCACGCCGCGGCATCATCACGCCGGAAATGGAGTACGTGGCGATCCGCGAA AATCAGCGTCTGGAAGCGGTGACCGATGCGAGCTTGCGTAAGCAGCATCCGGGCGAGGCGTTCGGCGCCTCGATCCAGCA GCGCATCACGCCGGAGTTCGTACGCGAGGAGATCGCACGGGGGCGCGCGATCCTGCCCAACAACATCAATCATCCTGAAA GCGAGCCGATGATCATCGGTCGCAATTTCCTCACCAAGATCAACGCCAACATCGGCAACAGCGCCGTGTCTTCGGGCATT GCCGAAGAAGTCGAGAAGCTGGTGTGGTCGATCCGCTGGGGCGGCGATACGGTGATGGATCTGTCCACCGGCAAGCACAT CCATGAAACGCGCGAATGGATCATCCGCAACTCGCCGGTGCCGATCGGTACAGTGCCGATCTATCAGGCATTGGAAAAAG TCGACGGACGTGCCGAGGCGCTGACCTGGGAAATTTTCCGCGACACCTTGATCGAACAGGCCGAACAGGGCGTGGATTAC TTCACCATCCACGCCGGCGTACTGTTGCGCTACGTACCGCTGACCGCAAAGCGGGTGACCGGCATCGTGTCGCGTGGCGG TTCTATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAAAATTTTCTCTATACGCACTTCGAAGACATCTGCCAGATCA TGAAGGCCTACGACGTGGCGTTCTCGTTGGGCGATGGCTTACGCCCCGGCTGCATTGCCGACGCGAATGACGCGGCCCAA TTCGGCGAGCTGGAAACGCTGGGCGAGTTGACCAAACTGGCGTGGAAGCACGATGTGCAAACCATGATCGAAGGCCCCGG TCATGTGCCGATGCAATTGATCAAGGAGAACATGGACAAGCAGCTGCGCGAATGCGGCGAGGCGCCGTTTTACACCCTGG GGCCGCTGACCACCGACATCGCGCCGGGCTACGACCACATCACCAGCGCGATCGGTGCGGCAATGATCGGCTGGTTCGGC ACGGCAATGCTCTGCTATGTCACTCCGAAAGAGCATCTGGGTTTGCCCAATCGGCAGGACGTGCGCGACGGCATCATGGC CTACAAGATCGCCGCGCACGCAGCCGACCTCGCCAAGGGGCATCCGGGCGCGCAGGTGCGCGACAACGCCCTGAGCAAGG CGCGTTTCGAGTTCCGTTGGGATGACCAGTTCCATCTCGGTCTGGATCCGGAAAAGGCCAAGGAGTTCCACGACGAGACG CTGCCCAAGGACGCGCACAAGCTGGCGCACTTCTGTTCGATGTGCGGGCCGCATTTCTGCTCGATGAAGATCACCCAGGA CGTACGCGATTACGCGGCCGAGCACGGCATGGACGACGCGCAAGCGTTATCGACAGGAATGCAGGAGAAGTCGGCGCAGT TTCTGGCGCAAGGTGCGCAGGTGTATCGCCCCATGTGA Protein sequence : MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVQGSRADLQVPMREIALTRTPTLFGGEENPPLSVYDTSGPYTDPQVAIDL AVGLAPLRAHWIAERGDTVALDGLSSSFGRGREHDARLDAVRFPARRLPRVAREGANVTQMHYARRGIITPEMEYVAIRE NQRLEAVTDASLRKQHPGEAFGASIQQRITPEFVREEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEALTWEIFRDTLIEQAEQGVDY FTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQ FGELETLGELTKLAWKHDVQTMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRWDDQFHLGLDPEKAKEFHDET LPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGMDDAQALSTGMQEKSAQFLAQGAQVYRPM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 71 |
