Gene Information

Name : pyk (PXO_02118)
Accession : YP_001914793.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 3781842 - 3783242 bp
Length : 1401 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
GTGCTGGATACGTTGTTCAAGGCGGGCGTCAACGTGGTGCGCCTCAACTTCAGCCACGGCGACCCGTCCGGGCAGGCCAA
GCGTGCTGCCGAAGTGCGTGCCGCTGCGGCCCGCGTCGGCGCCGAAGTCGGCATCCTTGCCGACTTGCCGGGTCCGAAGA
TCCGCATCGAGCGTTTTGCCGAAGGCAAGATCAAGCTGACCATGGGCGATCGCTTCGACCTGGTGGCCGATGCCAATGCG
CCGGCCGGCGACCAGCACCAGGTCGGCGTCAGCTACCTGGGCCTGCCGCAGGACGTGACTGCTGGCGACGTGCTGCTGCT
CGACGATGGCCTGATGCAACTGCAGGTCACCGACGTGCAGGGCGCGCGCATCGTTACCACCGTGCTCAACGATGGCGTGT
TGTCCGACCGCAAGGGCCTCAACAAGCAGGGCGGCGGCTTGTCGCTCGGCGCGTTGACCGAGCGCGACAAAGAGCTGATC
GGTATCGTCGCCAAGATCGGCGTGGATTTCATCGCCGTGTCGTTCTGTCGCAATGCGCAGGACATGCAAGACGCCCGTCA
GATCGCCAAGCAGCACGGCTGCGACGCGCAGCTGGTGTCGAAGATCGAGCGCACCGAAGCGATCGAAAACCTGGTCGAGA
TCGTCGAAGCCTCCGATGTGGTGATGGTGGCGCGTGGCGACCTGGGCGTTGAAATCGGCGATGCCGAATTGCCCGGGCTG
CAGAAGAAGATCATTCGCGAATCGTTGGCGCAGAACAAAGTGGTGATCACCGCCACGCAGATGCTGCAGTCGATGGTCGA
GAGCCCGATCCCGACCCGCGCCGAAGTGCTGGACGTGGCCAATGCGGTCATCGACGGCACCGATGCGGTGATGCTCTCGG
CCGAAACCGCTGCCGGTGCCTATCCGGTGCGTGCGGTGGAAGCGATGGCGCGTATCTGCCTGGGTGCCGAGCACCAGTTC
GAATTCGATACCGACTTCGAAGCGGCGCAGCGTAATCTGCAGCGCGCCGACCAGGCCATCGCGATGGCGACCATGTTCCT
GTCCGAGCACATCGGTCTGGGCGGCGTGGTGGCGTTGACCGAATCCGGCGGTACCCCGCGCTTTCTGTCGCGCTTCCGCT
CCAACATGCCGATCTATGCGTTCACCCGTCACGATGGCGCGCGTCGCCAGATGGCGATGATGCGTGGCGTGTTCCCGATC
AACTTCGACAGCCGCGGCCTGACCCCGCGCGAAGCCGCACGTGCGGCGATCCGTCTGTTGGTGGAGAACGAGCGCATGGG
CCCGGGCGACCGCGTGGTGTTTACCAGCGGCGAGCACATGGAAACGCACGGCGCCACCAACACGCTGCGTTTGCTGGAAG
TGGGCGACGACGGCCGCGCTACCGGTCTGGGCGAGCTGTAA

Protein sequence :
MLDTLFKAGVNVVRLNFSHGDPSGQAKRAAEVRAAAARVGAEVGILADLPGPKIRIERFAEGKIKLTMGDRFDLVADANA
PAGDQHQVGVSYLGLPQDVTAGDVLLLDDGLMQLQVTDVQGARIVTTVLNDGVLSDRKGLNKQGGGLSLGALTERDKELI
GIVAKIGVDFIAVSFCRNAQDMQDARQIAKQHGCDAQLVSKIERTEAIENLVEIVEASDVVMVARGDLGVEIGDAELPGL
QKKIIRESLAQNKVVITATQMLQSMVESPIPTRAEVLDVANAVIDGTDAVMLSAETAAGAYPVRAVEAMARICLGAEHQF
EFDTDFEAAQRNLQRADQAIAMATMFLSEHIGLGGVVALTESGGTPRFLSRFRSNMPIYAFTRHDGARRQMAMMRGVFPI
NFDSRGLTPREAARAAIRLLVENERMGPGDRVVFTSGEHMETHGATNTLRLLEVGDDGRATGLGEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 9e-74 46
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-60 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-61 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-61 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_001914793.1 pyruvate kinase VFG0479 Protein 3e-61 41