Gene Information

Name : xylA (PXO_03848)
Accession : YP_001911558.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 386996 - 388333 bp
Length : 1338 bp
Strand : -
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGAGCAACACCGTCTACATCGGCGCGAAAGAATATTTCCCCGGCATCGGCAAGATCGGTTTCGAAGGCCGCGAGTCGGA
CAACCCGCTCGCGTTCAAGGTCTACGATGCCAACAAGACCATTGGCGACAAGACCATGGCCGAGCATCTGCGCTTTGCCG
TGGCCTACTGGCACAGCTTCTGCGGCAATGGCGCCGATCCGTTCGGCCCGGGTACGCGTGCGTATCCGTGGGATGTGGGC
AACAGCGCGCTGGCGCGGGCTGAAGCCAAATCCGATGCCGCGTTCGAGTTCTTCACCAAGCTCGGCGTGCCGTACTACTG
CTTCCACGACATCGACCTGTCGCCGGATGCCGATGACATCGGCGAATACGAGAGCAACCTCAAGCACATGGTGGGTGTTG
CCAAGCAGCGTCAGGCCGACACCGGCATCAAGCTGCTGTGGGGCACGGCCAATCTGTTCTCGCATCCGCGCTACATGAAT
GGTGCCTCGACCAACCCGGACTTCAACGTCGTCGCGCGTGCGGCGGTGCAGGTCAAGGCCGCGATCGATGCCACGGTGGA
GCTGGGCGGCGAAAACTACGTGTTCTGGGGCGGCCGCGAAGGCTATGCCTGCCTGCACAACACGCAGATGAAGCGCGAGC
AGGACAACATGGCGCGGTTCCTCACCCTGGCGCGCGACTACGGCCGCAGCATCGGCTTCACCGGCAACTTCCTGATCGAG
CCAAAACCCATGGAGCCGATGAAGCATCAGTACGATTTTGATAGCGCGACCGTGATCGGTTTCCTGCGTCAGCACGGTCT
GGATCAGGACTTCAAGCTCAACATCGAAGCCAACCACGCCACCTTGTCCGGCCATAGCTTCGAGCATGACCTGCAGGTCG
CCTCCGATGCCGGCCTGCTGGGCAGCATCGATGCCAACCGCGGCAACCCGCAGAACGGTTGGGATACCGACCAGTTCCCG
ACCGATCTGTACGACACCGTTGGTGCGATGCTGGTAGTGCTGCGTCAGGGTGGCTTGGCACCGGGGGGGTTGAACTTCGA
TGCCAAGGTGCGTCGCGAATCGTCCGATCCGCAGGACCTGTTCCTGGCGCACATCGGCGGCATGGACGCGTTCGCACGCG
GGCTGGAAGTGGCCAATGCACTGCTGACGTCCTCGCCGTTGGAGCAGTGGCGCGCCGAACGTTATGCCAGCTTCGACAAT
GGTACCGGCGCCGACTTTGCCGCAGGCAAGATCACGCTGGCGGATCTGGCCGCACATGCCGCCGGCAATGCGCCCAAGCA
GATCAGCGGCCGCCAGGAAGCGTACGAAAACTTGATCAATCAGTATCTGACGCGTTGA

Protein sequence :
MSNTVYIGAKEYFPGIGKIGFEGRESDNPLAFKVYDANKTIGDKTMAEHLRFAVAYWHSFCGNGADPFGPGTRAYPWDVG
NSALARAEAKSDAAFEFFTKLGVPYYCFHDIDLSPDADDIGEYESNLKHMVGVAKQRQADTGIKLLWGTANLFSHPRYMN
GASTNPDFNVVARAAVQVKAAIDATVELGGENYVFWGGREGYACLHNTQMKREQDNMARFLTLARDYGRSIGFTGNFLIE
PKPMEPMKHQYDFDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFP
TDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTSSPLEQWRAERYASFDN
GTGADFAAGKITLADLAAHAAGNAPKQISGRQEAYENLINQYLTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 7e-101 52
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 6e-101 52