Gene Information

Name : gpO (PXO_01362)
Accession : YP_001914549.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Unknown
Product : phage capsid scaffolding protein (GPO)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3543875 - 3544717 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCGGGCAAGACCAAGAAGTTCCGTTCCAACTGGTTTCGCGTGGCCGTCGAAGGCGCCACCACCGATGGCCGCACGAT
CCAACGTAGCTGGATCGACGACATGGCCGCCACCTACGACCGCGAGACCTACGGTGCGCGCATCTGGATCGAGCACATGC
GCAGCCTGCTGCCGGACTCGCCGTTCCGGGCGTATGGCGATGTCACTGCGGTCAAGGCCGAAGAGGTCGAGATCGATGGC
AGCAAGCGTCTGGCGCTGTTCGCACAGATCGAGCCGACCGCCGATCTGATCACCATCAACAAATCCAAGCAGAAGCTCTA
CACCAGCATCGAGGTGCAGGAGAAATTCGCCAACACCGGCAAGGCGTATCTGGTCGGCTTGGCCGTCACTGATTCGCCCG
CGAGCTTGGGTACCTCGATGCTGACCTTTGCCAGCCAACACCCGGATGCCAATCCGCTGGCCGATCGCAAGCAATCACCC
GGCAACCTGTTCACCGTCGCCGAAGAAACCACGCTGGAATTCAGCGAGGTCAGCGAAGGCTCGGTCGCCAACTTGCTTAG
CCGGATTCGCACCGCGCTCAGGAGCGAGGACGCAACCAACATCACTGCCCAGCAGTTCGCCGACCTCGGCCAGGGTGTCG
AAGAGATCGCCGAGCACGTGCGTGGCCAGGACGAACGGTTCGCCGGCCTGCAGGCCGAACACGCCGCGCAGAAGACCAAG
CACGAACAGCTGGCGAACGACCTGGCGCAGCTGCGCGAGTTGCTGTCGCAGCAGGCCGACCCCTCGCAGCCCACACGCCC
GGTGGTCACCGGCGGCGGCGCGGCCGTGCTGACCGACTGCTGA

Protein sequence :
MSGKTKKFRSNWFRVAVEGATTDGRTIQRSWIDDMAATYDRETYGARIWIEHMRSLLPDSPFRAYGDVTAVKAEEVEIDG
SKRLALFAQIEPTADLITINKSKQKLYTSIEVQEKFANTGKAYLVGLAVTDSPASLGTSMLTFASQHPDANPLADRKQSP
GNLFTVAEETTLEFSEVSEGSVANLLSRIRTALRSEDATNITAQQFADLGQGVEEIAEHVRGQDERFAGLQAEHAAQKTK
HEQLANDLAQLRELLSQQADPSQPTRPVVTGGGAAVLTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 5e-66 51
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 5e-45 41
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 5e-45 41