Gene Information

Name : glnA (PXO_03568)
Accession : YP_001911488.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 305626 - 307029 bp
Length : 1404 bp
Strand : +
Note : -

DNA sequence :
GTGGAAAATGTTGAAAAGCTGATCAAGGACAACAAGGTCGAGTTCGTCGACCTGCGCTTCGTCGATATGCGTGGTGTACA
GCAGCACATCACCTTTCCGGCCAATATCATCGAGCCGGCGCTGTTTGAAGAAGGCAAGATGTTCGACGGCAGTTCGATCG
CGGGTTGGAAGGGCATCAACGAGTCGGACATGGTGCTGCTGCCGGACGCAGGCACCGCGTATCTGGATCCGTTCTTCGCC
GATCCGACCATCGTGCTGACCTGCGACATCCTTGACCCGGCCACCATGCAGAGCTATGAGCGCGATCCGCGCGGCATCGC
CAAGCGCGCCGAGGCCTATCTGAAGTCGTCCGGCACCGCCGACCAGGCGTTCTTCGGCCCGGAGCCGGAATTCTTCATCT
TCGATTCGGTGCGCTTTGCCAACGACATGGGCCACACCTTCTTCCAGGTGGGTTCGGAAGAAGCGGCCTGGAATACCGGT
GAAAAGTACGACGGCGGCAATAGCGGCTACCGTCCGGGCGTGAAGGGCGGCTACTTCCCGGTTCCGCCGACCGACACCCT
GCACGACCTGCGCGCGGAAATGATCAAGACGCTGGAACAGGTCGGCATCGAAACCGAAGTGCACCACCACGAAGTGGCCA
CCGCCGGTCAGTGCGAAATCGGCACCAAGTTCAGCTCGCTGGTGCAGAAGGCCGACGAACTGCTGACGATGAAGTACATC
ATCAAGAACGTCGCCTACCGCAACGGCAAGACCGCCACCTTCATGCCCAAGCCCATCGTGGGCGACAACGGCTCGGGCAT
GCACGTGCACCAGTCGCTGGCCAAGGGCGGCGTCAACCTGTTCACCGGCGACGGCTACGGCGGTTTGTCGCAGCTGGCGC
TGTGGTACATCGGCGGCATCTTTAAGCACGCCCGCGCGATCAACGCCTTCGCCAACTCCGGCACCAACAGCTACAAGCGT
CTGGTTCCGGGCTTCGAGGCACCAGTGATGCTGGCCTATTCGGCGCGTAACCGCTCGGCGTCGTGCCGTATTCCGTGGGT
CACCAACCCGAAGGCGCGCCGCATCGAAATGCGCTTCCCCGATCCGTTGCAGTCCGGCTACCTGACCTTCACCGCGCTGA
TGATGGCCGGCTTGGACGGCATCAAGAACCAGATCGACCCTGGCGCACCGAGCGACAAGGACCTGTACGACCTGCCGCCG
GAAGAAGAGAAGCTGATTCCGCAGGTCTGCTCCAGCCTGGATCAGGCCCTGGACGCGCTGGACAAGGACCGCGAGTTCCT
CAAGGCCGGCGGCGTGATGAGCGACGACTTCATCGACGGCTATATCGCGCTGAAGATGCAGGAAGTCACCAAGTTCCGTG
CTGCGACCCACCCGTTGGAGTACCAGCTGTACTACGGCAACTGA

Protein sequence :
MENVEKLIKDNKVEFVDLRFVDMRGVQQHITFPANIIEPALFEEGKMFDGSSIAGWKGINESDMVLLPDAGTAYLDPFFA
DPTIVLTCDILDPATMQSYERDPRGIAKRAEAYLKSSGTADQAFFGPEPEFFIFDSVRFANDMGHTFFQVGSEEAAWNTG
EKYDGGNSGYRPGVKGGYFPVPPTDTLHDLRAEMIKTLEQVGIETEVHHHEVATAGQCEIGTKFSSLVQKADELLTMKYI
IKNVAYRNGKTATFMPKPIVGDNGSGMHVHQSLAKGGVNLFTGDGYGGLSQLALWYIGGIFKHARAINAFANSGTNSYKR
LVPGFEAPVMLAYSARNRSASCRIPWVTNPKARRIEMRFPDPLQSGYLTFTALMMAGLDGIKNQIDPGAPSDKDLYDLPP
EEEKLIPQVCSSLDQALDALDKDREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-106 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_001911488.1 glutamine synthetase, type I VFG1399 Protein 2e-108 52