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Name : PXO_00978 (PXO_00978) Accession : YP_001913716.1 Strain : Xanthomonas oryzae PXO99A Genome accession: NC_010717 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 2630169 - 2631545 bp Length : 1377 bp Strand : + Note : - DNA sequence : GTGAGCGCCCTGTTCGGCGCCACCCCGGCCGATTGGCTGGATGCACGCAATCTGCGCCTGGCCACGCGCCTGGGCACCCT CGGCCTGGAACCCACCGCCGGCCGCACCCTGATCCGCGAAGGCATCCTGCGCCGTGCGGTCGGCCTGACCCTGGAAGCCA CAGGCTGCGAAGCGCCGATGGGCGCCACCTGCAAGGTCGAAGTCGATGGCGGCTGGCTCGATGCCGAAGTGGTCGGTTTC GCCGGCGAACGGACCTATTTGATGCCCAGTGCCGAACTGCACGGCCTGCTGCCGAATGCGCGCGTGGTGCCCTCGCGGCA CCGCGGCGGCGTGGAAGTGGGCGAAGGCCTGCTCGGCCGCGTCATCGACAGCGACGGCACCCCGCTGGACGGCAAGGGCC CGATCCGCGCCGAAGGCAGCGTCGGCATGGCCGGCGTGTCGATCAACCCGCTGGCGCGCGAACCCATCACCACCTCGCTG GATGTCGGCGTACGCGCCATCAACGCCATGCTGCCGATCGGCCGCGGCCAGCGCGTGGGCCTGTTCGCCGGCTCCGGCGT CGGTAAATCGACGCTGCTGGGCATGATGACCCGCTTCACCGCGGCCGACGTAATCGTGGTCGGGCTGATCGGCGAACGTG GCCGCGAAGTGCGCGATTTCGTCGAGACCACCCTGGGCGAAGAAGGCCTGCGCCGCGCCGTCGTGGTGGCCGCCCCAGCC GACCGCCCGCCGTTGGCGCGTCTGCATGGTGCCTATCGCGCCACCGCCATCGCCGAATGGTTCCGCGACCAGGGTTTGAA CGTGCTGCTGCTGATGGATTCGCTGACCCGCTTCGCCCAGGCGCAGCGCGAGATCGGCCTGTCGGTCGGCGAGCCGCCGA CCACCCGCGGCTACCCGCCGTCGGTGTTCGCCAAATTGCCGGCGCTGGTGGAACGGGCCGGCAACGGTGCCAAGGGCCGC GGCTCGATCACCGCGTTCTACACCGTGCTGACCGAAGGCGACGACCCGCAGGACCCGATCGCCGACGCCGCCCGCGCCAT TCTGGACGGCCACATTCTGCTCTCGCGTCGGGTTGCCGACAGCGGCCTGTACCCCGCCATCGACCTGGAATCCTCGGTCA GCCGCGTGGTGCAGGACATCGCCGACGACACCTGGCGCCTGCGCATCCGCAAGCTCAAGCGGCTGCTCTCCGCCTACACC GCCAACCGCGACCTGATCGCCATCGGCGCTTACCAGCGTGGCAGCGACCCGGCCACCGACGAAGCATTGGCGCGCTGGCC GGAGATCGTCGAATTCCTAGGGCAGGACGTACACAAGGCGTCGGTCCTGAGCGACAGCCTGTCCGCCCTGCAGCAGCTGG TCGAACCCGAGAACTAA Protein sequence : MSALFGATPADWLDARNLRLATRLGTLGLEPTAGRTLIREGILRRAVGLTLEATGCEAPMGATCKVEVDGGWLDAEVVGF AGERTYLMPSAELHGLLPNARVVPSRHRGGVEVGEGLLGRVIDSDGTPLDGKGPIRAEGSVGMAGVSINPLAREPITTSL DVGVRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVVAAPA DRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGR GSITAFYTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIADDTWRLRIRKLKRLLSAYT ANRDLIAIGAYQRGSDPATDEALARWPEIVEFLGQDVHKASVLSDSLSALQQLVEPEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-73 | 50 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-73 | 50 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-73 | 50 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-73 | 49 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 8e-71 | 49 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-72 | 49 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 8e-71 | 49 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-73 | 49 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-72 | 49 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 2e-68 | 49 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 7e-66 | 49 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 2e-60 | 47 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-60 | 47 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-61 | 47 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 4e-61 | 47 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-61 | 47 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-55 | 45 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 4e-55 | 45 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 7e-53 | 45 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 9e-56 | 45 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 8e-56 | 45 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 4e-61 | 44 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 3e-56 | 44 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 1e-56 | 44 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 7e-56 | 44 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-55 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG1254 | Protein | 9e-101 | 60 |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG2499 | Protein | 2e-95 | 58 |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG2331 | Protein | 2e-89 | 57 |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG0390 | Protein | 2e-68 | 51 |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG0192 | Protein | 3e-66 | 49 |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 4e-70 | 48 |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG0515 | Protein | 2e-61 | 47 |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 3e-69 | 46 |
| PXO_00978 | YP_001913716.1 | flagellum-specific ATP synthase | VFG2459 | Protein | 1e-56 | 41 |
