Gene Information

Name : PXO_00574 (PXO_00574)
Accession : YP_001913450.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2353933 - 2354604 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
GTGATCCAGCAGATGATCCAGCAGTGGCAGGAGAAGGCCAGAACCGCCCGGCTGTGCCGGTTGCTGGGGGTGAGTCGTTC
GGGGGTGTATGCGGCGCGCCGACGGCGACCGGCTCCACGCGCTGATGTACTTGCGGCAGCGGTGCAGACGGCCTTCCAGG
CCAGCGGCGGCAACTATGGCAGCCGTCGATTGAGCGCCAGCCTGAAGGCCCAGGGCCTGCCCGCTGGTCGCCACCGGGTC
CGCCGCCTGATAAAGCGCCACGGGCTGAAGGCGCGCTGGAAACGCAAGTTCACCCACACCACCGACAGCCGGCACGACTT
GCCTGTGGCGGCCAACGTTCTGGATCGGCGCTTCAAGCCCAGTGCTGCGGACCAAGCCTGGGTGGCCGACATCACCTACA
TCCGCACCGAGCGCGGCTGGCTGTATCTGGCCGCCGTGCTGGACCTGTACTCGCGCAAGATCGTTGGCTGGGCGATGGCA
CCGAGCATGCCTGCCGAGCTGGTGTGCTGCGCCTTGCAGATGGCCATCGTCCTGCGCCAGCCCAAGCCGGGACTGATCAT
GCATACCGACCGCGGTAGCCAATACGCCAGTCAGGCCCACCGTGATCTGCTGGCGGCGGCTTCAACTCTGGATCGCAACA
CCAACGGTTGTGACGTGGTCCAGGCGACCTGA

Protein sequence : 
MIQQMIQQWQEKARTARLCRLLGVSRSGVYAARRRRPAPRADVLAAAVQTAFQASGGNYGSRRLSASLKAQGLPAGRHRV
RRLIKRHGLKARWKRKFTHTTDSRHDLPVAANVLDRRFKPSAADQAWVADITYIRTERGWLYLAAVLDLYSRKIVGWAMA
PSMPAELVCCALQMAIVLRQPKPGLIMHTDRGSQYASQAHRDLLAAASTLDRNTNGCDVVQAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39293.1 hypothetical protein Not tested LPA Protein 9e-27 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 3e-30 41
unnamed AAF09030.1 unknown Not tested SHI-O Protein 3e-30 41
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 3e-30 41
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 2e-30 41
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-30 41
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 3e-30 41
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 3e-30 41
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PXO_00574 YP_001913450.1 transposase VFG1706 Protein 1e-30 41