Gene Information

Name : PXO_00428 (PXO_00428)
Accession : YP_001913070.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Unknown
Product : IS1113 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 1970805 - 1971800 bp
Length : 996 bp
Strand : +
Note : -

DNA sequence :
TTGGGCGAGTTGCAGATCGAGACCCCGCGCGACCGCGCGGGCACGTTCGCGCCACAGTTGGTGAAGAAGCGCCAGGTGCG
GCTGGCGGGGATGGAGGAGAAGATTCTGGCGTTGTACGCGCGCGGCATGACCACGCGCGACATCGAGTCTGCGCTGGTGG
ACGTGTATGGGGTGGAGATATCGCATGGGTTGATCGCACAGGTGACCGACGCGGTGCAGGAGGAGGCGCGGGCATGGCAA
TCGAGGCCGCTGGAGGCGATCTATCCGATCGTGTGGCTGGACGGCATCGTGGTGAAGGTGCAGCACAACAAGCAGGTCAT
CAACAAGGCCGCGCACGTGGTGCTGGGGGTCAACCTGCGCGGGGAGAAGGAAGTGCTTGGCCTGTGGTTGGCTGAACACG
AGGGCGCCCAATACTGGCTGTCGGTGTTGACCGAACTGCGTCATCGCGGCGTGCGTGACATCTACATCGCCTGCATGGAT
GGCTTGAAGGGCCTGCCCGAAGCGGTGCAAGCGGTGTTTCCGCAGACGCTCACGCAACTGTGCATTGTGCATTTGGTGCG
GGCCAGCCTGCGCTACGTCAACGCAGGCGACAGCAAGGCGGTTGTGGCTGCGCTCAAGCGCATCTATCAGTCGGCCACGG
CGGAAGAAGCGGCGGCGGAACTGGAGGCGCTGGACACGCAGTGGGGCGACAAATACCGTGCGGTGGTCCGCTTGTGGCGG
GGCAACTGGGACAACATCATCCCGTTCTTGCAGTTCGTGCCGCAGATCCGCAAGGTGATCTACACCACCAATGCCATCGA
ATCGTTGAACATGGTCATGCGCAAGCTCACCCGCAACCGGCGTATTTTCCCCAACGACGATTCGGCGCTCAAATCGTTGT
TTTTGGCCGTGCGCGAGGCATCGAAGAACTGGCGGTCCATCCATCACTGGAAACCGGCTCTGCAAAGCTTCCAGGTGATG
TTCGGCGAAGAACGCGTGCCGATGAATGCGCTATGA

Protein sequence :
MGELQIETPRDRAGTFAPQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHGLIAQVTDAVQEEARAWQ
SRPLEAIYPIVWLDGIVVKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAQYWLSVLTELRHRGVRDIYIACMD
GLKGLPEAVQAVFPQTLTQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWR
GNWDNIIPFLQFVPQIRKVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVM
FGEERVPMNAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 1e-89 52
c5176 NP_757024.1 transposase Not tested PAI II CFT073 Protein 1e-57 46
unnamed AAL67403.1 putative transposase Not tested PAI II CFT073 Protein 8e-54 46
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 4e-76 46