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Name : clpB (PXO_00259) Accession : YP_001912744.1 Strain : Xanthomonas oryzae PXO99A Genome accession: NC_010717 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1599404 - 1602109 bp Length : 2706 bp Strand : + Note : - DNA sequence : ATGGCAGACATCAGTCGCGCCGCCTTGTTCGGCAAGCTCAACAAGACCACCTATCGCGGTATCGAATCGGCCACTGCGTT CTGCAGGCTACGTGGCGACCACGAAGTGGAACTGCTGCACTGGCTGCATCAGTTGCTGCAGGCGCAAGACGGCGACTTGC ACCGCATCGTGCGCCGTTTTTCGCTGGATGCGTCGCGGCTTGCACAGGACCTGACCGTGGCGCTCGATCGCCTGCCGCGC GGCGGTGGCGGACACTTCGATCTGTCGGCCAGCGTGGAGGAGGCAGTGGAACGCGCCTGGGTGCACTGCACGTTGCGTTA CGGGCGGCAACGCATCCGTGGCGGCGATCTGCTGGTAGCGATCCTGCACGCGCGTAGCCTGCGTCACGGGTTGCTGGCGA TGTCGAGCGAGTTCGCCAAGCTGCGCGCGGAAGCACTGGCGGACGATCTGGATGACATCGTCGCCGGCTCGCCGGAAGAC GATGCCACCGACGTTGCGGCGGCTGTCGCCCCCGTTGGGACTGGCGCAACAGGTGGTACTGCGGCGCTCGCGCTGTACAC GGTCGACCTCACCGCACAAGCGCGCGAGGGCAAGCTGGACCCGATCATCGGCCGCGACGAGGAGATTCGCCAGGTCGTCG ATATCCTGATGCGGCGCCGCCAGAACAACCCGATCCTGGTTGGCGAGGCCGGCGTCGGCAAGACCGCGGTGGTGGAAGGC TTCGCACAACGTATCGCGCGCGGCGATGTGCCGCCCGCGTTGCAGGATGTGCAGCTGCGCACGCTCGATGTCGGCTTGCT GCAAGCCGGCGCCAGCATGAAAGGTGAGTTCGAGCAGCGCTTGCGCGCAGTCATCGACGAAGTGCAGGCCAGCCCCAAGC CGATCATTCTGTTCGTGGATGAAACCCATACCCTGGTCGGCGCCGGTGGCGCGGCCGGCACCGGCGATGCGGCCAACCTG CTCAAGCCGGCACTGGCGCGCGGCACCTTGCGCACCGTAGGCGCGACCACCTTTGCCGAGTACAAAAAGTACATCGAAAA AGACCCTGCATTGACGCGGCGCTTCCAGGCCGTGCAGGTCGACGAGCCGGACGAGGCCAAGGCCGTGCGGATGATGCGCG GTGTCGCCTCGACGATGGAACAGCACCACCGCGTGCAGATCCTTGACGAAGCGCTGGAAGCGGCGGTCAAGCTCAGTCAC CGCTACATCCCGGCGCGCCAGCTGCCAGACAAATCGGTCAGTCTGCTCGATACCGCCTGCGCGCGCGTCGCGGTGAGCCT GCATGCCACGCCTGCGGAAGTGGACGACAGCCGTCGCCGCATCGAATCGCTGGACACCGAGCACGCCATCATCGAGCGCG AGCGTGCGATTGGCATCGTGGTCGATGAGCGTGCTGCCGCTTGCGCCAGCCTGCTGCAAAGCGAGCACGGCCGCCTGCGC GAGCTGGAACAGCGCTGGGTTGCCGAAAAGGCGTTGGTCGATGCGCTGTTGTCGCTACGCGCGCAACTGCGAGGCGGCAA CGCGCCGGTGGAAGGGACCGGCAGTGCGTTGGAAACGGAGGCCGAACAGCGTGCGTCTGGCGATATCGCGGTGCTCGAAA CGCCGGTACACGTGGATCGCGATGCGCTCTTAGCACGTTTGCAGTTGGTACAGGCCGAACTGGCCGCATTGCAGGGCGAA TCGCCGCTGATCCTGCCCACAGTCGATTACCAAGCCGTGGCCGCGGTGGTCGCCGACTGGACCGGCATCCCTGTCGGGCG CATGGCCCGCAACGAGATCGACACCGTGCTGCGCTTGCCCGAACTGCTGGCCAAGCGCGTGATCGGCCAGGACCACGCCA TGGAGATGATCGCCAAGCGGATCCAGACCAGCCGCGCCGGCCTGGACAACCCGGACAAACCGATCGGCGTGTTCCTGCTG GCCGGAACCTCCGGCGTCGGCAAGACCGAAACCGCACTCGCCCTGGCCGAAACGCTGTACGGCGGCGAGCAAAACCTGAT CACCATCAACATGAGCGAGTACCAAGAGGCGCACACTGTCTCCTCGCTCAAGGGCGCACCGCCGGGCTATGTGGGCTACG GCGAAGGTGGCGTACTGACCGAAGCGGTGCGCCGCAAGCCGTACGCGGTCGTGCTGCTGGACGAAGTGGAAAAAGCCCAC CCGGACGTGCACGAACTGTTCTTCCAGGTCTTCGACAAGGGCTGGATGGAAGACGGCGAAGGCCGCCGCATCGACTTCCG CAACACCTTGATCATCCTTACCAGCAACGCCGGCACCGACCTGATCGCCAGCCTGTGCAAGGACCCGGAATTGATGCCGG ATCCGGACGGCATGGCCAAGGCATTGCGCGAACCGTTGTTGAAGGTGTTTCCGCCGGCATTGCTCGGGCGGCTGGTGGCG ATTCCGTATTACCCGCTCAGTAACGCCATGCTCGGACAGATCGTGCGATTGCAGTTGAACCGCATCAAGCAGCGGATCGA AGAGCGCTACAGGATTCCGTTCGACTACGACGAGTCTGTAGTGGAGCTGGTGGTGAGCCGGTGTACCGAGAGCGAATCGG GTGGCCGGATGATCGATGCGATTTTGACTAACTCGATGTTGCCGGAGATTAGCCGCAAATTTCTTCGTGGGGTAGTGGAC CGGAAACGGACTGAACGCCTTGACATTCGTGTCGAAGATTCCGCATTGGTTTATTCGTTTCTCTGA Protein sequence : MADISRAALFGKLNKTTYRGIESATAFCRLRGDHEVELLHWLHQLLQAQDGDLHRIVRRFSLDASRLAQDLTVALDRLPR GGGGHFDLSASVEEAVERAWVHCTLRYGRQRIRGGDLLVAILHARSLRHGLLAMSSEFAKLRAEALADDLDDIVAGSPED DATDVAAAVAPVGTGATGGTAALALYTVDLTAQAREGKLDPIIGRDEEIRQVVDILMRRRQNNPILVGEAGVGKTAVVEG FAQRIARGDVPPALQDVQLRTLDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPIILFVDETHTLVGAGGAAGTGDAANL LKPALARGTLRTVGATTFAEYKKYIEKDPALTRRFQAVQVDEPDEAKAVRMMRGVASTMEQHHRVQILDEALEAAVKLSH RYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRRRIESLDTEHAIIERERAIGIVVDERAAACASLLQSEHGRLR ELEQRWVAEKALVDALLSLRAQLRGGNAPVEGTGSALETEAEQRASGDIAVLETPVHVDRDALLARLQLVQAELAALQGE SPLILPTVDYQAVAAVVADWTGIPVGRMARNEIDTVLRLPELLAKRVIGQDHAMEMIAKRIQTSRAGLDNPDKPIGVFLL AGTSGVGKTETALALAETLYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYAVVLLDEVEKAH PDVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAGTDLIASLCKDPELMPDPDGMAKALREPLLKVFPPALLGRLVA IPYYPLSNAMLGQIVRLQLNRIKQRIEERYRIPFDYDESVVELVVSRCTESESGGRMIDAILTNSMLPEISRKFLRGVVD RKRTERLDIRVEDSALVYSFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 51 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-124 | 48 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-124 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001912744.1 | chaperone ClpB | VFG2076 | Protein | 0.0 | 70 |
| clpB | YP_001912744.1 | chaperone ClpB | VFG2084 | Protein | 3e-132 | 42 |
