Gene Information

Name : PXO_04881 (PXO_04881)
Accession : YP_001912661.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Virulence
Product : two-component system regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1496826 - 1498226 bp
Length : 1401 bp
Strand : -
Note : -

DNA sequence : 
GTGCGCAGCATGAGCGAACCCAAAAGTGCCCTGGTTGTCGATGACGAGCGTGATATTCGCGAGTTGCTTGTTCTCACCTT
GAGCCGTATGGGGCTGCGCATCAGCACCGCTGCCAATCTGGCCGAAGCGCGCGAATTGCTGGCCAACAATCCCTACGATC
TGTGCCTGACCGACATGCGCCTGCCCGACGGCAATGGCATCGAGCTGGTCACCGAAATCGCCAGGCAGTACCCGCAGACG
CCGGTGGCGATGATCACCGCGTTCGGCAGCATGGACCTGGCCGTGGAAGCGCTGAAAGCCGGCGCCTTCGATTTCGTCAG
CAAACCGGTGGACATCGGCGTGCTGCGCGGCTTGGTCAAGCACGCGCTGGAATTGAACAACCACGACCGCCCTGCTCCGC
CGCCGCCACCTGAACAGGCCAGCCGCCTGCTCGGCGACTCCAGCGCGATGGAGAGCCTGCGCGCCACCATCGGCAAGGTG
GCGCGCAGTCAGGCGCCGATCTACATCGTCGGCGAATCCGGGGTGGGCAAGGAGCTGGTTGCACGCACCATCCACGAACA
AGGCGCACGCGCCGCCGGCCCGTTCGTCCCGGTCAACTGCGGCGCCATTCCCGCCGAGCTGATGGAAAGCGAATTCTTCG
GCCACAAGAAAGGCAGCTTCACCGGCGCGCATGCCGACAAGCCCGGGCTATTCCAGGCCGCGCACGGCGGCACCTTGTTC
CTGGACGAAGTGGCCGAATTGCCGTTGCAGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAATCGGTGCGTCCGGT
CGGCGCCTCCGGCGAAACCCTGGTGGACGTACGCATCCTGTCGGCCACCCACAAGGACCTGGGCGACCTGGTCTCCGACG
GCCGTTTTCGACACGATCTGTACTACCGCATCAACGTGATCGAACTGCGCGTGCCGCCGCTGCGCGAACGCGGCGGCGAC
TTGCCGCAGCTGGCCGCTGCCATCATCGCGCGCCTGGCGCACAGCCACGGCCGCACCATTCCACTGCTGACCCAATCCGC
GCTCGACGCACTGGATCACTACGGCTTCCCCGGCAACGTGCGCGAACTGGAAAACATCCTTGAACGCGCCCTTGCCCTGG
CCGAAGACGACCAGATCAGCGCCACCGACCTGCGCCTGCCCGCCCACGGCGGCCACCGCCTCGCCGCCACACCCGGCAGC
GCCGCCGTGGAACCACGCGAAGCCGTCGTCGACATCGACCCCGCCTCGGCCGCCCTACCCTCCTACATCGAACAACTGGA
ACGCGCCGCGATCCAGAAAGCGCTGGAAGAAAACCGCTGGAACAAGACCAAGACCGCCGCGCAGTTGGGTATCACGTTTC
GGGCGCTGCGTTACAAGCTCAAGAAGTTGGGGATGGAGTGA

Protein sequence : 
MRSMSEPKSALVVDDERDIRELLVLTLSRMGLRISTAANLAEARELLANNPYDLCLTDMRLPDGNGIELVTEIARQYPQT
PVAMITAFGSMDLAVEALKAGAFDFVSKPVDIGVLRGLVKHALELNNHDRPAPPPPPEQASRLLGDSSAMESLRATIGKV
ARSQAPIYIVGESGVGKELVARTIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLF
LDEVAELPLQMQVKLLRAIQEKSVRPVGASGETLVDVRILSATHKDLGDLVSDGRFRHDLYYRINVIELRVPPLRERGGD
LPQLAAAIIARLAHSHGRTIPLLTQSALDALDHYGFPGNVRELENILERALALAEDDQISATDLRLPAHGGHRLAATPGS
AAVEPREAVVDIDPASAALPSYIEQLERAAIQKALEENRWNKTKTAAQLGITFRALRYKLKKLGME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-104 48
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-104 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PXO_04881 YP_001912661.1 two-component system regulatory protein BAC0467 Protein 5e-70 43
PXO_04881 YP_001912661.1 two-component system regulatory protein BAC0089 Protein 4e-70 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PXO_04881 YP_001912661.1 two-component system regulatory protein VFG1214 Protein 1e-128 63
PXO_04881 YP_001912661.1 two-component system regulatory protein VFG0116 Protein 2e-58 42