Gene Information

Name : PXO_03342 (PXO_03342)
Accession : YP_001911346.1
Strain : Xanthomonas oryzae PXO99A
Genome accession: NC_010717
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 142808 - 143497 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGCCCTCGTTACCCTCCGCAACGTCACCAAGACCTACCAGCGCGGCCCGGAGAAGGTGCAGGTGCTGCATGGCAT
CGATCTGGAAATCGAGCGCGGCGACTTCGTCGCGCTGATGGGTCCTTCCGGTTCGGGCAAGACCACACTGCTGAACCTGA
TCGGTGGACTCGACACGCCGTCAGGCGGCGAGATCGAGATCGAAGGCGAGCGCATCGACCTCATGAGCGGCGGTCAGCTG
GCCACCTGGCGCAGCCATCACGTCGGCTTCGTGTTCCAGTTCTATAACCTGATGCCGATGCTCAACGCGCAGAAGAACGT
CGAGCTGCCACTGCTGCTGACCAACCTCGGTGCAGCGCAGCGCAGGCGCCATGCCGAAATCGCGTTGACGCTGGTCGGCC
TCGATGAGCGCCGCAGCCACAAGCCCAGCGAATTGTCCGGCGGCCAGCAGCAGCGCGTGGCGATTGCGCGGGCCATCGTC
TCCGATCCCACCTTCCTGATCTGCGACGAGCCCACCGGTGACCTCGACCGCCACAACGCCGAGGAGATCCTCAAGCTGCT
GCAGCAACTCAACCGCGAGCACGGCAAGACCATCATCATAGTCACCCACGATCCCAAGGCCGCCGAGTACGCCTCGCATA
CCGTGCATCTGGACAAGGGCGAGCTGGCCGACGCACTGGTCGCTGACTAA

Protein sequence : 
MTALVTLRNVTKTYQRGPEKVQVLHGIDLEIERGDFVALMGPSGSGKTTLLNLIGGLDTPSGGEIEIEGERIDLMSGGQL
ATWRSHHVGFVFQFYNLMPMLNAQKNVELPLLLTNLGAAQRRRHAEIALTLVGLDERRSHKPSELSGGQQQRVAIARAIV
SDPTFLICDEPTGDLDRHNAEEILKLLQQLNREHGKTIIIVTHDPKAAEYASHTVHLDKGELADALVAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PXO_03342 YP_001911346.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-47 49
PXO_03342 YP_001911346.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-39 46
PXO_03342 YP_001911346.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-37 42
PXO_03342 YP_001911346.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-40 42