|
Name : HPSH_04600 (HPSH_04600) Accession : YP_001910385.1 Strain : Helicobacter pylori Shi470 Genome accession: NC_010698 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3736 EC number : - Position : 905016 - 906002 bp Length : 987 bp Strand : - Note : COG3736 Type IV secretory pathway, component VirB8 DNA sequence : ATGGAAAAAGTTTGCATGAACGCATGGGAGTTGCCTAAGGTTTTAGAAGAAAGATTAAAAGAAAAATATGGCGATGATTG GGAAAAATATGTTAAGGCTAAAGCAATAAACGAAGAAGAGCTTGAAGAACAAGTCAAAGATAAAGCCAAAGAGCAACAAA AGATACAAAGAGAAAAAACACTCAGTGGATTTTTAAAAAAAGTTGGTCTAAAAAAGCGTGATATGTTACAAAGCACTATG CTGTTTGATGGAGTCAAAGAAGCTGATGCGCTTTTTCAAGCAGAGCGTAAAATTGGCGATTGGATCTTTAGCAGTGCGGT ATTCTTTTTTGCTTTAGCTCTTATAGAAGCCATTATTATTATATGCTTATTGCCCTTAAAAGAAAAAGTGCCTTATTTGG TAACCTTTTCAAACGCTACACAAAATTTTGCCATAGTCCAAAGAGCAGACAAGAGTATTCGTGCCAATCAAGCGCTTATA AGACAACTGGTAGCATCTTATGTCAATAATAGAGAAAATATTTCAAATATAAAAGAGCAAAACGAAATAGCCCACGAAAC CATTAGATTGCAAAGTGCATTTGAAGTATGGGATTTTTTTGAAAAACTTGTTTCCTATGAACATAGCATTTACACTAATA TCAATCTAACACGAAAAATTAGCATTATCAATATCGCTTTAATTAGTAAAACCCAAGCCAATATTGAAATATCCGCACAA CTTTTTAATAAAGAAAAGTTAGAAAGCGAAAAGCGTTATAGAATAATTATGACCTTTGAATTTGAACCCATTGAAATTGA TACAAAATCTGTTCCCTTAAATCCTACAGGCTTTATTGTTACAGGTTATGATGTAACTGAAATTGCGATTTTAAAAGACC TAGATGAAAAAAATAAAGTCAAAGATGATGGTGTGAAATCTAGGATTATCCATACCGAGAAAAAAGACCCTCATATGAGC CAATATAAAGATGTTAAGGAACAATAA Protein sequence : MEKVCMNAWELPKVLEERLKEKYGDDWEKYVKAKAINEEELEEQVKDKAKEQQKIQREKTLSGFLKKVGLKKRDMLQSTM LFDGVKEADALFQAERKIGDWIFSSAVFFFALALIEAIIIICLLPLKEKVPYLVTFSNATQNFAIVQRADKSIRANQALI RQLVASYVNNRENISNIKEQNEIAHETIRLQSAFEVWDFFEKLVSYEHSIYTNINLTRKISIINIALISKTQANIEISAQ LFNKEKLESEKRYRIIMTFEFEPIEIDTKSVPLNPTGFIVTGYDVTEIAILKDLDEKNKVKDDGVKSRIIHTEKKDPHMS QYKDVKEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB8-1 | YP_002301100.1 | VirB8 type IV secretion protein | Virulence | cag PAI | Protein | 8e-62 | 55 |
