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Name : HPSH_04595 (HPSH_04595) Accession : YP_001910384.1 Strain : Helicobacter pylori Shi470 Genome accession: NC_010698 Putative virulence/resistance : Virulence Product : conjugal plasmid transfer system protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3504 EC number : - Position : 903475 - 905016 bp Length : 1542 bp Strand : - Note : COG3504 Type IV secretory pathway, VirB9 components DNA sequence : ATGAAAAAACTCACTCTATCGCTATTTTTATATTGTGCTTTACTTAGTGCTGAAGAGGATATTTTTAGAAACCATACAAA TGAAACTGATCTTACAAGTTCTTTTGAACATGGCAAAGAAAACAACAATCTTATCCCAGCAAAATCTGATAGTTTAGAAA GTTTCAAAGAACAAGAAAACAAAGAAAAAGCCAAACAGCTTATGGATTTAAAAGCCTTACAGAGCGTGTATTTTTCTAAA AATAGAAAATTGCAAGACAATAATTTTAATGTCTTATATGTGGCAGGCAACACCAACAAAATCCGCTTACGCTATGCGAT GACTACCACTTTTATTTTTGACAATGATCCTATTATCTATGTGAGTTTAGGAGATTCTAGCGGATTTGAACTCACTTACC CCACTAATGATCATTACGACTTGTCCAACATGCTAGTGATCAAACCCTTGCTTATAGGGGTGGATACAAACCTAACCGTA GTCGGAGCGAGCGGAACAATTTATACTTTTTACTTGTTTAGCACCACTTACACTAGCAAATTTCAAAGCTATTTTTCAGT GTTTGTCTCTAATAAAAGGGCTATCGGTAAGCTCAATATTTTGTCTAAAAACGAGCTAGAAAAAAGGGAGCAAGAACAAT GGGCTAAAACAGAAACAAATACAAATAGCTCCAATAAACAAGACAAACAAAAGCTTGACTACAGAAAAATCAATTATGAG AGCAAGGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAAGTCAATCACATTTTCATTGAAAAAGCTAAAATCAA TCGTGGTTATTTGCAAAAACCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGATGCGC TTGATATAAAGGCACTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATATGACAGAGATCAAGCCTTTTCAAAA TTTCCTTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTATATTATTGCTGA AGATGTTTCTAAAAAATGGACTTTAAGGAGCGGTAAGGAATATGTGTGCGTAAGAAGAGATAAACACAAATACCAAAAAT CTAAGGACTTCATGCGCTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGCCAAACGAAACAACGTTCACTTGATT GAAGACACTACGCCTCAACCTAAAAATGCCATTAGCGTAACGGAGTTGTTAGATCAAATCAAAAACCAAACTCCAAATGA AAAATGCCGATCCTTAAATGAAGAAGAAATTAAGACTTTAGAAGAGGTTAAAAACATCATAAAAGCTCCCAAGCCTTTGC AAAAAGATTTGAAAAACAAGCTTAAAAAACACACAATCAAAACCCATTATTGCGTGCCTATCCCCTATATAGAAAGACCA AAAACCACTGATGGTTTAGAGAATAATAAAAAGGGGATGAATAACACCCCAAAACAAAATCAAGCAAACCCTATTAAAGA GATTAAAGAAAACAAGAAATGA Protein sequence : MKKLTLSLFLYCALLSAEEDIFRNHTNETDLTSSFEHGKENNNLIPAKSDSLESFKEQENKEKAKQLMDLKALQSVYFSK NRKLQDNNFNVLYVAGNTNKIRLRYAMTTTFIFDNDPIIYVSLGDSSGFELTYPTNDHYDLSNMLVIKPLLIGVDTNLTV VGASGTIYTFYLFSTTYTSKFQSYFSVFVSNKRAIGKLNILSKNELEKREQEQWAKTETNTNSSNKQDKQKLDYRKINYE SKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQKPKHKRTWWSLWLYKKPSDDALDIKALDVFDDGKYTYFRYDRDQAFSK FPYTYKVVDGYDNPINSRVVGNYIIAEDVSKKWTLRSGKEYVCVRRDKHKYQKSKDFMRLKRLLEQDEAMKAKRNNVHLI EDTTPQPKNAISVTELLDQIKNQTPNEKCRSLNEEEIKTLEEVKNIIKAPKPLQKDLKNKLKKHTIKTHYCVPIPYIERP KTTDGLENNKKGMNNTPKQNQANPIKEIKENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 0.0 | 98 |
