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Name : HPSH_04590 (HPSH_04590) Accession : YP_001910383.1 Strain : Helicobacter pylori Shi470 Genome accession: NC_010698 Putative virulence/resistance : Virulence Product : ComB3 protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2948 EC number : - Position : 902243 - 903478 bp Length : 1236 bp Strand : - Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAAAAAACTTCTTTTACTTTTAGAGCATAAAATCATAAAAATTGGCTTAATTATTGTGATTGTATTAGCTGGTTTTTT TCTTTTTTACGAACAAGAAATCAAAGAAAAAGCTGTTAATGTTTCTCAAGGTAAATTCCCTACTTCATCTTATTTGTTTC AAGCTTACGAAGGCATTAAGAATAAAATAGATACTATCAATGAAGTGAAACCAAACGATGAAACTAAAAGCGTTAATGAG AATATAGAAAAAACACAAAAAGATTTAGATGATTTTAATGCGCTAGTGCAAAAATTACCAAATTTGCCTAAGGATTTTGA TAAAACGCTTATTAAGCCACAAAGTCCATCCTTCAATTACAATACCGCTAACGAAGAAGAAAAAACCCGCCTTGTGATTT TAGCGTCTCGTGTTAGCAGCCAAAAAGAAACACAGCCTCCAACCTCTATAAAAAATAGTGTTTCTAATACAAAATACAAA GAAAAACAAGAACTTGAAAAAGAATACGGCTCTAGCGGTTTTAAAAATTTTAAAAGAAAAAATGTAGCTAGCAGTGAAAA CAAACTTTTGAGAACGATTACAGCTGACAGAATGATCCCAGCCATTCTGATCACTCCTATTAGTAGTGAAATAGGGGGGA GTAAGATAGTCGCTCAAGTGGAGAGTGATATATACGCAACGATGGGTAGAGCGGTTTTAATCCCTAAAGGGAGTAGAGCC ATAGGTTATTACAACTCTAATAACAAAATAGGAGAATACCGCTTAGGAATTGCTTGGAATAGGATAATCACGCCACAAGG GGTCAATATTATACTAAGCGATGCTAAGGGGGCTGATATCAAGGGCTATAACGGCATGATAGGCACACTCCATAACAAAT ATTGGGAACGCTATGGTATTCCTTTATCCTTAAGCACCTTGTCAAATGGGCTACTCATAGGTCTTACTAGCGGTCTTACC GAAGCGATGAAAAACAAAAAGGGTGGTTTTAACCAAAACTATTTTGGAGATTACATGATGATGCAAATGACGAGGCAAAC TGGTATCAGCCTAAATGATATTATCGCTCAAATCATGCGAGAGCAAATCAGGATTAAGCCCATTATCACTATTAGAGAAG GAAGCCATATTTTTATTAGTCCTAATACGGATATTTGGTTTCCTATCCCTAAAAACAATGAAGTCTTAGCGAAATTTTTT AATGAAGAAAAGGAGCAAAACAATGATACAAAATAG Protein sequence : MKKLLLLLEHKIIKIGLIIVIVLAGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIKNKIDTINEVKPNDETKSVNE NIEKTQKDLDDFNALVQKLPNLPKDFDKTLIKPQSPSFNYNTANEEEKTRLVILASRVSSQKETQPPTSIKNSVSNTKYK EKQELEKEYGSSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA IGYYNSNNKIGEYRLGIAWNRIITPQGVNIILSDAKGADIKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT EAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNDIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF NEEKEQNNDTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB10-1 | YP_002301098.1 | VirB10 type IV secretion protein | Virulence | cag PAI | Protein | 3e-132 | 80 |
