Gene Information

Name : HPSH_04565 (HPSH_04565)
Accession : YP_001910378.1
Strain : Helicobacter pylori Shi470
Genome accession: NC_010698
Putative virulence/resistance : Virulence
Product : VirB11 type IV secretion ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG0630
EC number : -
Position : 900387 - 901328 bp
Length : 942 bp
Strand : -
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGATTTCTAATCTTTTAAAAAGTTACCTTGATGACTTTATGCCTATTTTAAGCCAGCCTAATTTAAATGAAGTGGTTTT
TAATAAAGAAAAAGAGTATTTCTTGCACCGCCCAAAGGAAAAAGTGAGGTGTTTTAATGAAAAATTTACTAATGATTATT
TGTTAGTTTTTTGTGAGCAATTAGCCATTTTTAGAAACCAAAAATTCACTCTAAAAACGCCTAAGTTAAACACTTCTTTG
CCTTACACACAAATTAGAATTAACGCATTACACCCTAGCATTATTGCTAGTTCTAATATTTCTATCAATATCAGAGTGCC
TAGCAATTTCAAGTTTGAAATTAACGCCTTTAAATTAAGTGAGAAATGTCTGGCTAAAAACATTACCCATGATTTTTTAC
TTAGCTTAGTAAGTGCAGGTAAAAATATTTTAATAAGTGGTGGCACAGCTAGTGGCAAGACTAGCTTTGTTAATTCTTTG
ATTGAAAATATCCCCAAAAACGAAAGGGTGGTTACTATTGAAGATAGTCCTGAGTTAAAAATCAGTAACGAAGACCAAGT
TAATATTTTAGTAGATAAAAGTGGGAGCGGATTTTTTACTTATGAAGATGGATTAAATGCGGCTATGAGAATGTCTCCTG
ATAGATTATTATTAGGTGAAATTGACACGCATAATACTGCGTTATTTTTGCGTTTAGCAAATACTGGGCATAGCGGAATG
ATAAGCACCTTACACGCCAATAGTGTAGCAGATGCTTTTATAGCTATTTGTCAGAATATAAACTTGAATAAAGGCGGTAA
GCCTACGCCTAAAGAAACGCTTTTAGATTATTTTTGCACTGGTATGGACTATGTTATCCAAATCAAAAAAAAAGGTAGTG
ATAGGATAATTGATGATGTTTTAAATGTTAAAAGCGAATTTAAAAAGGAGTTGATGTTATGA

Protein sequence : 
MISNLLKSYLDDFMPILSQPNLNEVVFNKEKEYFLHRPKEKVRCFNEKFTNDYLLVFCEQLAIFRNQKFTLKTPKLNTSL
PYTQIRINALHPSIIASSNISINIRVPSNFKFEINAFKLSEKCLAKNITHDFLLSLVSAGKNILISGGTASGKTSFVNSL
IENIPKNERVVTIEDSPELKISNEDQVNILVDKSGSGFFTYEDGLNAAMRMSPDRLLLGEIDTHNTALFLRLANTGHSGM
ISTLHANSVADAFIAICQNINLNKGGKPTPKETLLDYFCTGMDYVIQIKKKGSDRIIDDVLNVKSEFKKELML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 1e-135 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPSH_04565 YP_001910378.1 VirB11 type IV secretion ATPase VFG1979 Protein 4e-46 42