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Name : HPSH_04510 (HPSH_04510) Accession : YP_001910367.1 Strain : Helicobacter pylori Shi470 Genome accession: NC_010698 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG4646 EC number : - Position : 883375 - 891786 bp Length : 8412 bp Strand : + Note : COG0827 Adenine-specific DNA methylase DNA sequence : ATGCAAAAAAAGAAAGCTAAAAACCCACAACCGAATTTATTTAGCATCTTAGATAATAGCGATATTGCAACAAACAATCT TGCTGAAGAATCAGACAAGGTCAATGAAACACAAGAGCCACTCCCTTATGTCGTAAAAACTCAAATCAATACAGCAAGAA TGATTTCTAGAAATCCTATTGAATGGGCAAGGTATTTAAGCTTTGAAAGACGAGTGCATAAGGATAATAGTAGAGAAGAT GTCAATTTCTTTGCTAATGGTGAGATAAAAGAAAGTTCTCGTGTTTATGAAGCGAATGAGAAAGGGTTTGAAAGGCGTAT AACTAAAAAATACGATCTGATTGATAGAAATAAAGAATTTTTTTCAAAAGAAATTGACATTTTAACCTACAAAAACAGCT TAGAAGAATTGAAAGAGCAAGGTTTAGAAATCCAATTGACCCACCACCATGAAACGCATAAGAAAACCTTAGAAAATGGC AATGAAATCGCTAAAGAATACGACTATCTTAAAGATATTTATCACGAAGTAGAAAGAACAAAAGATGGTGAATTGGTAAG AGAAGTAATCCCTAGTATTTCTAGCGCTGAGTATTTTAAGCTCTATAACAAACTGCCTTTTGAATCAATAAACAATGAAA ATACCCAATTGAATACTAATAACAATGAAGAAGTTAAAAAACTAGAATTTGAATTAGCTAAAGAAGTGCATGTTTTAATC CTAGAACAAAAATTGCTTTCAGCAACAGATTATTATTCTTGGATAGATAAAGATGATTATGCGTCTTTTGATTGGAAAAT GCATAGGCTTATCAATGAAGATAAACTCAAAGAAAACCATCTTATCACAGATAACGCTAATAAGATTAAGCGATTTTTCT TTAATAATGATTTTATTTTAGGCTGGACTAAAGAAGAACAAAGCGCTATGCAAGAAAACAGAGATTATTCTTTAAGAAGC GCTCTTTTAAGTTTGGAAGAAATCGCTCAAGCAAAAATTGAATTGCAAGAATACTATGAAAGCGTTTATGTTAATGGTGA TGGGAGTAAAAGAGAAATCAAGCCTTTCAAAGAAATTTTAAGAGACATCAACAATTTTGAAAAAGCTTATAAGGAGCGTT ATAACGAATTGGTAAGCTTGAATGAAGCAATCATTCAAGCTAAAGAGGGGAGTAATGAACAGCAAAATTCTAATGCAAAT AACAATAACACTATTAAAAATACAATAGAGACTAATACTTCTATTGGTAACAATATTATTCAAAATAATGATAATAATAA TCCAAATTTAAGCATTGCTGATTTAGAATTAGAGCAACAGAATTTAGGAGAACAAAATGGAAAAGAAAGAACAAATCGCG CAGATGAGCCGAATAGAACTAGAGCAGGAATTCCGCAAGAAATTCACCGCAGAAGCGAACATGGAGGACAGCAAGAGGGA GTGGAGCGATCGAGTGATGAAGAACTTTTACACCAAGACTCTAGTTTATTTATTGAGCCTAGAGAGCAGGGAGGAACAAG AGGAGTTTATAGATCTAGCGACCAACAGGCAGTTTCAGAAAAATCCCATAGAGAGAGAGATAAACTACATGAACATGTAT CTAGAGGAGATGGAGTATCAGCAAGAGCAGATACAAGAGCAGATAGCAATGGAGCATCAAGTCAAGCAAGCCGAATGGAA AATGGAGCAAGAAGCGAAGAAAAGGGGGATAATCCCAGCGATGAGAGAGGAGTATCACCCACACCGCAATCCCCATCTCA TCAACAAAATAGCTCCAGAGATTTGGGGCTTTCTCTCTCTAGAGAACAGCCAGGACAGACTGGACGCTTACGCCTTTTTA ATCATGGACAGATGGGCTCATTATTTCCCACAGACCATGAAAACCAAAGATCAAAGAACGATAATGAGCTTGATAGAAGC AGTAATAGAACAAACGAAAATGGAGACAAAAGCCCTAGACAGAATGGAAGCGCAAATCAAGAGAGCGCAAGGAGTGAGCG ATATGGAATTGCTCAAGGAAGCTCAAGTCAATCAGTATTACCACTTGCTCAAAGCCGATTACATCATGCAGGACTCAGCG CACCAAATGGACTTGGAAACCTTGAAGAAGACAGGGATCAAGAGAGAGGACTTTTATCAAATTTAGACCATTTAGAAAGC CTGCTTAACGCTATTAGAAACAACACCATAGCGAGTGAGCCTGACTTTAGAACTAGGCTCTTAGAAGCCATTCAAAACAA CGAGCCTTTAAAAGATAGCATTGTAGGGATGCAGCTCCTTAAAGACCCTACGACTAAAATCTTTTATGACAAATTCCAAT TAAAAATCAGCCCTAAAAAAGTATTAGAGATTTTAGAAAATCGCATTAAAAAATCCATTGAAACAGCGAATGAAACGCTA AACGCATTCAACGCGCTGGATAGTCAAGCCATTGATGGAAACGCTATTTCTAATAGTGTAGGATTAAATCCCACACAAGA GAGTGGAATAACAGACAATAGCGTAGAGTTAAATAACGCTCAAGAACAAACCGCGCAAGAGCAAGACACGCAAGAAAACG CGCAAACCACGATAAAACAAGAAACACCAACCGCACCAGCCATCCCCCTTAATCCTAAAATAGATTTTAAACCGAGCGAA GAAGTTTTAATTAAGGGAGCTAAAACTCGCTACAAGGCTAACATAAAAGCCATTGAGCTTTTAAAAGAATTGCAAGCCAA ACAAGAGATCTTAAAAGGCGATTATTACGCCACTCAAGAAGAGCAAAAAATCCTAGCGCAATTTAGCGGATGGGGTGGGT TAGAAAGCTACTTTAAAAAGGATCAACGCCCTGAAGAATTTAAGGAATTAAACGCCTTACTCACTAAAGATGAATTCAGA AGAGCTTATTCAAGCACAAGAGACGCTTACTACACTCCTAAATTAGTTATTGATAGCATTTATCAGGGATTAGATCAATT AGGGTTTAATAACGACAACCATCAAAAAGAAATCTTTGAACCCAGTTTAGGCACAGGCAAATTCATCGCTCATGCGCCAA GCGATAAGAATTACCGCTTTATGGGAACAGAATTAGATCCTATTAGCGCTAATATTTCTAAATTCCTTTACCCTAATCAA GTCATCAACAACACCGCTTTAGAAAACCACCAATTCTATCAAGAATACGATGCGTTTGTGGGCAATCCTCCTTATGGCAG TCATAAAATCTATAGCTCCAATGACAAAGAATTGAGTAACGAGAGCGTTCATAATTACTTTTTAGGGAAAGCTATCAAAG AATTGAAAGATGATGGCATAGGAGCGTTTGTGGTGAGTTCTTGGTTTATGGATAGTAAAAACCCTAAAATGAGAGAACAC ATCGCGCAAAACACCACTTTTTTAGGAGCGATAAGATTGCCTAATAGCGTGTTTAAAGCAACAGGCGCTGAAGTGAGTAG CGACATTGTGTTTTTTAAAAAATGCGTTGATGAAGCAACCAATCAAAGCTTCACTAAAGCTATGCCTTATTATGACAAGA TCATTGATAGCTTGGATAATGACACCCTTTTTGCCTTGCAAAACAACCGCTTTGATAGTTTTACTCCTAGCGATCAACTT AAGATTGTCAATGCGATTGCAAGCCATTTTGGTTTCAAACAAGAAAAATTGCAACGCTGGTATGAAAAAATAGACACCGC TAACTTTGGCTACAGAGAACAAGACTATAAGATCATCAAAGGCTTCATTGATAAAGTTGGCGAGAATAATATCAATCTCA ACGAACAAACCTTAAATGAATACTTTATCCACCACCCTGAAAACATTCTAGGGCATTTGAGTTTGGAAAAAACCCGCTAT AGCTTTGAAATAAATGGCGAACAAATTTACAAATACGAGTTGCAAGCTTTAGAGGATAAAAGCTTAGATTTATCCCAAGC TCTTAATCAAGCGATAGAAAAATTGCCTAAAGATGTCTATCACTACCATAAGACTACCCTTAAAACAGACGCTCTCATCA TTGATGCAAATAACGAACGCTATCAAGAAGTTCAAAAGCTTATCAAAAATTTAGAAAGGGGGGAATTAGTCAAGTGGGAT AATCTTTATTTCCAACTAGAACAAAATAATGAAAGGGGCATTTTTTTAAAACCCACTAAAATCAACTCTAAAGTCCAAGA TTCACGACTAAAAGCCTATTTTAAAATTAAAGACGCTTTGAATGATTTAACGAGTGCAGAATTAAGCCCCTTAAGCTCTG ATTTGGAGCTAGAAAGTAAAAGAGTTAGGCTCAATCTTGTTTATGATGAATTTGTCAAGAAATTTGGCTATCTCAATGAG AATAAAAATCGTAAGGACATCAAACAAAATTTGTATGGCGCTAAAGTCTTAGGATTAGAAAAAGACTTTGAAAAAGAAAT CACCCCTAGAAGCGCCAAAATGCAAAACATAGAGCCAAGGCAAGCTCAAGCTAAAAAAGCTCAAATCTTTTTTGAAAGGA CTTTAAACCCTAAAAAAGAACTTATTATCACTAACGCCAAAGAGGCATTAATTGCAAGCATCAATCAAAAAGGGGGTTTA AATTTGCATTTCATTAGAGATCATTTCGCAACCCAAAGCTTAGAAACCACGATTAAAGAACTTTTAGAGCAAAAACTTAT TTATAAAGACCACAAGGATAATGGCGACTATGTTTTAGCGAACGATTATTTGAGCGGCAATGTAAAAAGAAAACTCAAAG AAGTTAAAGAAGCCATCAATCAAGGCGTGGAGGGATTAGAGGCTAATGTGAAAGATCTAGAGCTGATTATCCCTAAAGAT TTGAAAGCCACTGAAATCATGGCTAATATCAACAGCCCTTGGATACCCACTCAGTATTTAGAAGAGTTTTTAATAGAATT AGCCGCTAACCATTATGAAAAGCAATACGGCGATAAAATGACAGATTACCAACTAGGCAATCTCAAAGAAGGCATCAAAG TAGAACACCTAAGCGGTGCTTATGAAGTTTTGGTTAGAAACAATGAATTAAACGAGCTTTATGGTATTAGGCATAAAGAC AAACCGCATTCTTATAAAGCGCCTTTTGAAAGCCTTTTAATAAAAGTCTTAAACAACAAGGATTTGAGCGTTAAATACGC CCAAGTTGATCCTAATGACCCTAAAAAAGAAATCTTTATCACTGATGAAGAGCAAAGCAATCTCGCTAGACAAAAAGCAG AAGAATTGAAAGAAGCTTTTAAAGACTGGATTTATAAGGATTATACAAGAAGAACCCATTTAGAGCAAATCTATAATGAC ACTTTCAACAATTCTGTTTTAAAAACCTATGATGGCTCGCAATTAGAACTAGAGGGCTTTAACCACCATATCAGCTTGCG CCCCCACCAAAAGAACGCTATTTTTAGAACCATCCAAGACAGGGCGGTGTGTTTAGACCATCAGGTTGGAGCAGGCAAGA CTTTGTGCGCTATAGCCAGTTGCATGGAACAAAAACGCATGGGGTTAGTGAATAAAACGCTCATTGCCGTGCCTAACCAT TTAACCAAGCAATGGGGCGATGAATTTTATAAGGCTTACCCTAACGCTAATGTGTTAGTTGTTGATAGCAAGGACATCAC TGAAAAAGAAAGAGAGCTTTTATTCAATCAAATCGCTAACAACAATTATGACGCTGTGATTATCGCGCACACCCATTTGG AATTATTGTCTAACCCTAGAGGAATCATAGAAGAATTGAAAGAAGAAGAACTAGTGAATGCCGAAAAAAACTTTGAAAGG CAAGAACTGGCTTATAAAAATAACCCTAGAGAAACTAAAAAACCCAATGAAAGAGCCTTTAAAAGCAAGCTGGATAAAAT CCGTGCTAAATACGATGCGATTTTAGAAAAACAAGGCTCTCATATTGATATTAGTCAAATGGGGATTGACAATTTGATTG TGGATGAAGCCCACTTATTCAAAAATCTAGCCTTTGAAACTTCTATGGAAAAAATTGCAGGGCTTGGTAACCAACAAGGC TCTAATCGCGCCAGAGATTTGTTTATTAAAACGCGCTACTTGCATCAAAACAATAAGAAAATCATGTTTTTAACCGGCAC GCCTATAGCTAATTCCTTGAGTGAAATGTATCACTTGCAACGCTACCTGACCCCTGATGTGTTGAAAGAAAGAGGGTTAG AATTCTTTGATGATTGGGCTAAGACTTATGGGGAAGTGGTGAATGATTTTGAATTAGACACTTCCGCTCAAAGTTATAAA ATGGTTAATCGCTTTTCTAAATTTAGCGATGTGCAAGGCTTAAGCACCATGTATAGAGCTTTTGCGGATATTGTCTCCAA TGATGATATTTTAAAGCATAACCCCCACTTTGTGCCTAAAGTGTATGGGGATAAACCTATCAATGTGGTGGTGAAAAGAA GCGAAGAAGTGGCTCAATTTATTGGCGTGGCTGGTGAAAATGGCAAATATAATGAAGGCTCTATCATTGATAGGATGCAA AAATGCGAGGGCAAGAAAAGCAAAAAAGGGCAAGACAATATCCTTTCTTGCACCACAGACGCTAGAAAAGTGGCTTTGGA TTACCGCTTGATTGACCCTAACGCTAAAGTAGAAAAAGAATTTTCTAAAAGCTATGCTATGGCAAAAAATATCTATGAGA ATTATTTAGAAACTAATGCCACTAAAGGCACACAACTTGGTTTCATAGGTCTATCCACACCCAAAACCCATAGCCAAAAA GTGAGTTTAGAAGCGCTAGATAACACTCATGAGATAGAAAATAAAAATCCCCTAGATGAAGCTCAAGAACTTTTAGAGAG CCTGTCTAGTTATGATGAAAATGGCAATCTTATCGCTCCTAGCAAGAAAGAATTAGAGAACGAACTCAAAGAGAAAGAGG CTAAAAGCGTCAATTTAGATGAAGAGCTGGCTAAAGGCTGTAAGTTTGATGTTTATAGCGATGTTTTAAGGCATTTAGTC CAAATGGGTATCCCACAAAATGAAATCGCTTTCATCCATGACGCTAAAACCGAAGAGCAAAAACAGGATTTGTTTAAAAA GATTAATCGTGGCGGAGTCAGGGTATTATTGGGCAGTCCCGCTAAAATGGGCGTAGGCACTAATGTGCAAGAAAGATTAG TCGCTATGCATGAATTAGATTGCCCATGGAGACCTGATGAATTGTTGCAAATGGAAGGGCGTGGGATAAGACAAGGCAAT ATTTTGCACCAAAACGATCCTGAAAATTTTAGAATGAAAATCTATCGCTACGCCACTGAAAAAACTTATGATAGCCGTAT GTGGCAAATCATAGAGACTAAATCTAAAGGCATAGAGCAATTTAGAAACGCGCACAAATTAGGCTTGAATGAATTAGAAG ACTTTAATATGGGGAGTTCTAATGCAAGTGAGATGAAAGCAGAAGCAACAGGTAATCCCTTAATTATTGAAGAAGTCAAA TTGAGAGCTGAAATCAAAAACGAAGAAGCAAAATATAAAGCTTTCAATAAAGAAAATTACTTCAATGAAGAGAATTTGAA AAACAACTCTTCTAAATTGGGTTATCTTAAACAGGAATTGAAAGATTTAGAAACGCTTCAAAGCTCTGTAATGATCCCCA CTCATACAGAGATCAAGCTCTATGATTTGAAAAATGAAGAGAGTAAGGATTATGAGCTTATCAAAGTTAAAGAAGTAGAG CCTTTAAAAGAAAACGCCTCTATGAGTGAAGAATTAACGCACAAAAAACTCAAAGAACAAAACAAGCAAATAGCCGAACA AAATAAAGAAAAGCTAGATGCTATTAAAAAGCAATTTGCAAGCAATTTGAACGACTTGTTTTTCAATGAGGAAAGAGATT GCAAGCTTTTAGAATACAAGGGCTTTGTGGTGAATGCTTATAAAACTAAGTATCAAGTGGAGTTTAGTTTAAACCCTAAA GACAATCCAAATATTGCCTATAGCCCTAGCAATATGGTTTATAAAAACGATACTGCCAACATGTTTAGCTCTTATAATTT CTGCGGCGAGATTAAATTTGATGGGTTTTTAAAAAGATTGGATAACGCTATCACTAAACTCCCTGAAAAAATCAAGGAAT TAGAAAACTCCATTAAAATCACTCAAGAAAATATCGCTAAATACACAAGATTAGTGGAACAAAAACCTCCTTACCCACGA CTAGAATACTTGCAAGCTTTAAAATGGGATCATAAAACTCTAATAGATGATTTAGCTAAAATGAGCAAAGACAGAGATTA TAAGCCTGTGTTCAACCCTAAATCTCAAGAAGTCTTAGAGAAAATGAACGCTGAAAAAAGAGCGAGTTTGGAGAATGAGG GTGTAACAGAAGAGATAAAAGAACAAGCCAAAGAAGAAGTGCATAGACCAATGAAAAAAGTATCTAGTGGTGATTACGAC ATGGGGATGTGA Protein sequence : MQKKKAKNPQPNLFSILDNSDIATNNLAEESDKVNETQEPLPYVVKTQINTARMISRNPIEWARYLSFERRVHKDNSRED VNFFANGEIKESSRVYEANEKGFERRITKKYDLIDRNKEFFSKEIDILTYKNSLEELKEQGLEIQLTHHHETHKKTLENG NEIAKEYDYLKDIYHEVERTKDGELVREVIPSISSAEYFKLYNKLPFESINNENTQLNTNNNEEVKKLEFELAKEVHVLI LEQKLLSATDYYSWIDKDDYASFDWKMHRLINEDKLKENHLITDNANKIKRFFFNNDFILGWTKEEQSAMQENRDYSLRS ALLSLEEIAQAKIELQEYYESVYVNGDGSKREIKPFKEILRDINNFEKAYKERYNELVSLNEAIIQAKEGSNEQQNSNAN NNNTIKNTIETNTSIGNNIIQNNDNNNPNLSIADLELEQQNLGEQNGKERTNRADEPNRTRAGIPQEIHRRSEHGGQQEG VERSSDEELLHQDSSLFIEPREQGGTRGVYRSSDQQAVSEKSHRERDKLHEHVSRGDGVSARADTRADSNGASSQASRME NGARSEEKGDNPSDERGVSPTPQSPSHQQNSSRDLGLSLSREQPGQTGRLRLFNHGQMGSLFPTDHENQRSKNDNELDRS SNRTNENGDKSPRQNGSANQESARSERYGIAQGSSSQSVLPLAQSRLHHAGLSAPNGLGNLEEDRDQERGLLSNLDHLES LLNAIRNNTIASEPDFRTRLLEAIQNNEPLKDSIVGMQLLKDPTTKIFYDKFQLKISPKKVLEILENRIKKSIETANETL NAFNALDSQAIDGNAISNSVGLNPTQESGITDNSVELNNAQEQTAQEQDTQENAQTTIKQETPTAPAIPLNPKIDFKPSE EVLIKGAKTRYKANIKAIELLKELQAKQEILKGDYYATQEEQKILAQFSGWGGLESYFKKDQRPEEFKELNALLTKDEFR RAYSSTRDAYYTPKLVIDSIYQGLDQLGFNNDNHQKEIFEPSLGTGKFIAHAPSDKNYRFMGTELDPISANISKFLYPNQ VINNTALENHQFYQEYDAFVGNPPYGSHKIYSSNDKELSNESVHNYFLGKAIKELKDDGIGAFVVSSWFMDSKNPKMREH IAQNTTFLGAIRLPNSVFKATGAEVSSDIVFFKKCVDEATNQSFTKAMPYYDKIIDSLDNDTLFALQNNRFDSFTPSDQL KIVNAIASHFGFKQEKLQRWYEKIDTANFGYREQDYKIIKGFIDKVGENNINLNEQTLNEYFIHHPENILGHLSLEKTRY SFEINGEQIYKYELQALEDKSLDLSQALNQAIEKLPKDVYHYHKTTLKTDALIIDANNERYQEVQKLIKNLERGELVKWD NLYFQLEQNNERGIFLKPTKINSKVQDSRLKAYFKIKDALNDLTSAELSPLSSDLELESKRVRLNLVYDEFVKKFGYLNE NKNRKDIKQNLYGAKVLGLEKDFEKEITPRSAKMQNIEPRQAQAKKAQIFFERTLNPKKELIITNAKEALIASINQKGGL NLHFIRDHFATQSLETTIKELLEQKLIYKDHKDNGDYVLANDYLSGNVKRKLKEVKEAINQGVEGLEANVKDLELIIPKD LKATEIMANINSPWIPTQYLEEFLIELAANHYEKQYGDKMTDYQLGNLKEGIKVEHLSGAYEVLVRNNELNELYGIRHKD KPHSYKAPFESLLIKVLNNKDLSVKYAQVDPNDPKKEIFITDEEQSNLARQKAEELKEAFKDWIYKDYTRRTHLEQIYND TFNNSVLKTYDGSQLELEGFNHHISLRPHQKNAIFRTIQDRAVCLDHQVGAGKTLCAIASCMEQKRMGLVNKTLIAVPNH LTKQWGDEFYKAYPNANVLVVDSKDITEKERELLFNQIANNNYDAVIIAHTHLELLSNPRGIIEELKEEELVNAEKNFER QELAYKNNPRETKKPNERAFKSKLDKIRAKYDAILEKQGSHIDISQMGIDNLIVDEAHLFKNLAFETSMEKIAGLGNQQG SNRARDLFIKTRYLHQNNKKIMFLTGTPIANSLSEMYHLQRYLTPDVLKERGLEFFDDWAKTYGEVVNDFELDTSAQSYK MVNRFSKFSDVQGLSTMYRAFADIVSNDDILKHNPHFVPKVYGDKPINVVVKRSEEVAQFIGVAGENGKYNEGSIIDRMQ KCEGKKSKKGQDNILSCTTDARKVALDYRLIDPNAKVEKEFSKSYAMAKNIYENYLETNATKGTQLGFIGLSTPKTHSQK VSLEALDNTHEIENKNPLDEAQELLESLSSYDENGNLIAPSKKELENELKEKEAKSVNLDEELAKGCKFDVYSDVLRHLV QMGIPQNEIAFIHDAKTEEQKQDLFKKINRGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQMEGRGIRQGN ILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHKLGLNELEDFNMGSSNASEMKAEATGNPLIIEEVK LRAEIKNEEAKYKAFNKENYFNEENLKNNSSKLGYLKQELKDLETLQSSVMIPTHTEIKLYDLKNEESKDYELIKVKEVE PLKENASMSEELTHKKLKEQNKQIAEQNKEKLDAIKKQFASNLNDLFFNEERDCKLLEYKGFVVNAYKTKYQVEFSLNPK DNPNIAYSPSNMVYKNDTANMFSSYNFCGEIKFDGFLKRLDNAITKLPEKIKELENSIKITQENIAKYTRLVEQKPPYPR LEYLQALKWDHKTLIDDLAKMSKDRDYKPVFNPKSQEVLEKMNAEKRASLENEGVTEEIKEQAKEEVHRPMKKVSSGDYD MGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0447 | YP_002301083.1 | DNA methylase | Not tested | cag PAI | Protein | 0.0 | 92 |
