Gene Information

Name : HPSH_04360 (HPSH_04360)
Accession : YP_001910337.1
Strain : Helicobacter pylori Shi470
Genome accession: NC_010698
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3586
EC number : -
Position : 850275 - 852344 bp
Length : 2070 bp
Strand : -
Note : COG1479 Uncharacterized conserved protein

DNA sequence :
ATGGAAGCAAAAGCTATGAAACTGCTAGACTTTATTGGTAAGAGTCAAGAAAGACAATTGGTTATTCCCATCTATCAGAG
GGTGTATAGTTGGGGAAATGAACAATGCAAGCAGTTATGGGATGATATTATCAAAACGGGTGGAAACGATCAAATAAAAG
GGCATTTTATCGGTTCTATTTTGTATGTGCATGATGGCATATACAAAATTGGCCACAACAAGCTTCTCATCATTGACGGC
CAACAAAGGCTCACTACTATCACGCTTTTACTCACCGCTTTAAGAAATCATTGGAGCGATAAGCGTAAAGAAATAGAGGA
CCACTATCTTATCAACAGCGATAAGGACGGCGATGAGAAATTCAGACTCATCCTCTCAGACTCTGATAAAGATACCTTGC
TATCTTTGATTGATAAAGACAGAAGAAAACCGATCAAGCCTTCATCAAAAATAATGGAAAATTTTAAATTATTTGAAGAA
TGGATCAGTAAAAACACCAACAAACTAGAAACGATTTTTAAAGGATTAGAAAAGCTTATGGTAGTTTATATTGCTTTAGA
AAAAGGAAAAGGTAATCCTCAACTTATCTTTGAGAGCATGAACTCAACGGGCAAGGATCTCACGGAAACGGATTTGATCA
GAAACTATATCGTGATGGAAACAGAGATTGAAAAGCAAGAATACTTTTATAATAAATACTGGAGGGATATGGAGGAGGAA
TTTGAACAGAGTGAGAGAGAGGATTTATTTAATAAATTTGTCCGGCATTACCTCACGATCAAAACAAGAGAAATCCCTAA
TATCAAGAAGGTTTATGCAGCTTTCAAGGATTACCGGCAAAAAGAGGGGATAGGAATAGAGGATTTATTAAAAGATTTAC
AAAAATATTGCGGGTATTTTTGCCAGATTGCATTCAAAAAAGAAGCCGATAAGGATTTAAACAAGGCTTTAGGTTTTTTG
GTGGATTTAGAGATGGATGTGATTTATCCGCTATTACTAGAGCTTTATAGCGATTATAGCGATGGGGTTTTATCCAAGGA
TGATTTTATCCGTAGCATCGCTTTGATAGAGAGCTATATTTGCAGAAGGGCGGTGTGCGAGCTTGGCACAAATAGTCTCA
ATAAAGTCTTTCCCTCTTTTACAAAGCACATCCAAAAAGACGAATATTTTAAAAGCCTAAAGGCGCATTTTGGTTGTCTG
ACAGAAAAACAAAGATTTCCAAACAATGATGAGTTTAAAGATTGTTTTATTACGATAGATTTTTATAAGTTTAAAAAAAA
TAAATACTTTTTTGAAAGGCTAGAAAATTTTGACACAAAAGAGCGAGTTTATACCCATGAATACACTATTGAGCACATCA
TGCCTCAAACACTCACGGAACAATGGAAAAAGGATTTGGGTGAAAATTTTCAAGAGATACACGATAAATACCTCCACACA
ATAGGCAATCTCACTCTAACCGCTTATAACCCTGAATACAGCAACAAATCTTTCCAAGAAAAACGAGACATGGAAAAAGG
CTTCAAGGATAGCCCATTAAGGCTCAATCAAAGTTTGAGGGATTTAGAATCTTTTGGCGAAGAAGAGATTAAAAAAAGAG
CTAATGATTTAGCGGATTTGGCTTTAAAGATTTGGACTTATCCAAATCTAGATGCAGAAACGCTAGAGAAATATAAACCC
AAGAAAGACAAGAAAGAAAAAAAGGTTTATGATTTAAGCTCTTATAATTTTAGTTCTCATTCAAGGGAATTATTTGATAT
TTTAAGCAAAGAGATTAAAGCTCTTGATGAAAAGATTGTTGAAAAATGTCATCAAAATTATATCTCTTATGGGTTTAGCA
CAAATTTTGTGGCTATTAAACCGCTAAACAAAGGATTAAAATTGTATTTAAATATGAAATTCAATGAATTGCAAGATGAA
AAAAATCTGGCAAGGGATACGACCGGTACAGGTAATCCAGCGAATTGGAACATAGAAGTCAAGCTAGAAACAAAAGAGAA
TATCCCTTATTGTTTGGGGTTGATCAAACAGGCTTTAGAAAAACAGATGGGTGGTAGGAACAGGCAATAA

Protein sequence :
MEAKAMKLLDFIGKSQERQLVIPIYQRVYSWGNEQCKQLWDDIIKTGGNDQIKGHFIGSILYVHDGIYKIGHNKLLIIDG
QQRLTTITLLLTALRNHWSDKRKEIEDHYLINSDKDGDEKFRLILSDSDKDTLLSLIDKDRRKPIKPSSKIMENFKLFEE
WISKNTNKLETIFKGLEKLMVVYIALEKGKGNPQLIFESMNSTGKDLTETDLIRNYIVMETEIEKQEYFYNKYWRDMEEE
FEQSEREDLFNKFVRHYLTIKTREIPNIKKVYAAFKDYRQKEGIGIEDLLKDLQKYCGYFCQIAFKKEADKDLNKALGFL
VDLEMDVIYPLLLELYSDYSDGVLSKDDFIRSIALIESYICRRAVCELGTNSLNKVFPSFTKHIQKDEYFKSLKAHFGCL
TEKQRFPNNDEFKDCFITIDFYKFKKNKYFFERLENFDTKERVYTHEYTIEHIMPQTLTEQWKKDLGENFQEIHDKYLHT
IGNLTLTAYNPEYSNKSFQEKRDMEKGFKDSPLRLNQSLRDLESFGEEEIKKRANDLADLALKIWTYPNLDAETLEKYKP
KKDKKEKKVYDLSSYNFSSHSRELFDILSKEIKALDEKIVEKCHQNYISYGFSTNFVAIKPLNKGLKLYLNMKFNELQDE
KNLARDTTGTGNPANWNIEVKLETKENIPYCLGLIKQALEKQMGGRNRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPB8_729 YP_003728750.1 hypothetical protein Not tested cag PAI Protein 0.0 78