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Name : HPSH_04140 (HPSH_04140) Accession : YP_001910293.1 Strain : Helicobacter pylori Shi470 Genome accession: NC_010698 Putative virulence/resistance : Unknown Product : glutamate racemase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0796 EC number : 5.1.1.3 Position : 802905 - 803672 bp Length : 768 bp Strand : + Note : converts L-glutamate to D-glutamate, a component of peptidoglycan DNA sequence : ATGAAAATAGGCGTTTTTGATAGCGGTGTGGGAGGTTTTAGCGTTTTAAAAAGCCTTTTAAAAGCGCAATTATTTGATGA AATCATCTATTATGGCGATAGCGCTAGAGTGCCTTATGGCACTAAAGACCCCACCACGATCAAGCAATTTGGCTTAGAGG CTTTGGATTTTTTCAAACCGCACAAGATTGAATTATTGATTGTGGCATGCAACACAGCGAGCGCTCTAGCTTTAGAAGAG ATGCAAAAGCATTCCAAAATCCCTATTGTGGGCGTGATTGGGCCAAGCATTTTAGCGATCAAACAACAAGTAAAAGATAA AAACGCCCCTATTTTAGTGCTAGGGACAAAAGCGACGATTCAATCTAATGCTTATGACAACGCCCTGAAACAACAAGGCT ATTTGAATGTTTCGCATTTAGCCACTTCTCTTTTTGTGCCTTTGATTGAAGAAAATATTTTAGAGGGCGAATTGCTAGAA ACTTGCATGCGTTATTATTTCACTCCATTAGAGATTTTACCTGAAGTGGTTATTCTAGGTTGCACGCATTTTCCCTTGAT CGCTCACCAAATTGAGGGCTATTTTATGGAGCATTTTGCCCTTTCAACGCCCCCCCTACTCATCCATTCTGGCGATGCTA TTGTGGAATATTTGCAGCAAAAATACGCCCTTAAGAAAAATGCATGCGCATTCCCTAAAGTGGAATTTCATGCGAGCGGC GATGTGGTTTGGCTAGAAAAACAGGCTAAAGAATGGCTCAAATTGTAA Protein sequence : MKIGVFDSGVGGFSVLKSLLKAQLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHKIELLIVACNTASALALEE MQKHSKIPIVGVIGPSILAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEENILEGELLE TCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQKYALKKNACAFPKVEFHASG DVVWLEKQAKEWLKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glr | AAR03910.1 | glutamate racemase | Not tested | cag PAI | Protein | 4e-100 | 98 |
| glr | AAR03882.1 | glutamate racemase | Not tested | cag PAI | Protein | 1e-101 | 98 |
| HP0549 | BAD13991.1 | - | Not tested | cag PAI | Protein | 6e-102 | 98 |
| HP0549 | BAD13881.1 | - | Not tested | cag PAI | Protein | 9e-99 | 98 |
| HP0549 | NP_207344.1 | glutamate racemase | Not tested | cag PAI | Protein | 9e-101 | 97 |
| glr | AAR03971.1 | glutamate racemase | Not tested | cag PAI | Protein | 3e-100 | 96 |
| glr | AAC44708.1 | Glr | Not tested | cag PAI | Protein | 1e-99 | 96 |
| glr | AAR03940.1 | glutamate racemase | Not tested | cag PAI | Protein | 5e-99 | 95 |
| murI | NP_223214.1 | glutamate racemase | Not tested | cag PAI | Protein | 6e-98 | 93 |
