|
Name : HPSH_03035 (HPSH_03035) Accession : YP_001910085.1 Strain : Helicobacter pylori Shi470 Genome accession: NC_010698 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 582079 - 583392 bp Length : 1314 bp Strand : - Note : COG2056 Predicted permease DNA sequence : ATGCTAGAAAATAGCTCTATGTGGAGCAATCCTGCCTTTGTGGCTATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATAAGCGCGACTCTCATAGCAGGACTTATGGGAGGGCTTGGGATCACGGAGAGTTTTAATG CAATGATAGATGGCATGAAAGGCAATTTAAACATCGCTTTAAGTTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAATCTCATTAAAGTCGCTTTGAGTAAATTAATAGGCCTAATGAACTACAAGCGATCCACTTTTTGCTTTTTGAC CGCTTTCATCGCATGTTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC ATTTAATGAATCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGCGCTTTAACCTTTGGCTTGCAAGCCCCCTACTTGGTG CTTCCCGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCTAATGGCGTTAGCGCTACCCTAGC GCAAATCACAGGAGTGATGTGGATAGCGGGGTTAGCGATGGTTGTTGGGCTATTTGTCGCTGTATTAACGCTATACAAAA AACCCAGACACTACAAAGAAAAATCTTTTAACATAGAAAATTACGACTCGCTTAAATTAAACTACCATGACTACTTGACT TTTATAGGGATTATCGTGGCGTTTGTGATCCAATTAGCCACCGATTCGATGCCCTTAGCCGCCTTTTTAGCGTTAGCGAT CATCTTATTAGGCCGTGGCATTAAGTTTAAAGAAACAGATTCGCTTATGGATGATAGCGTGAAAATGATGGCGTTTATCG CTTTTGTGATGTTAGTGGCTAGCGGGTTTGGAGAAGTGTTGCAAAAAGTGCATGCGATAGAAGGATTAGTGAATGCGATC ACAAGCGTAGTCCAAGGGAAGCTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTTTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATTCCTATCATCGCTGTGTTTTATGTCCCTTTATGCGCGAAATTAGGTTTTAGCATAGAATCTACGA TTTTACTCATCGGCATAGCCGCAGCTTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCCACTTGCGGG CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATTGT TTTTGGAGTGGTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSMWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGITESFNAMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALSKLIGLMNYKRSTFCFLTAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSATLAQITGVMWIAGLAMVVGLFVAVLTLYKKPRHYKEKSFNIENYDSLKLNYHDYLT FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNAI TSVVQGKLLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSIESTILLIGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLIVFGVVGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-58 | 41 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-58 | 41 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-58 | 41 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-58 | 41 |
