Gene Information

Name : nrdE (ETA_09380)
Accession : YP_001906882.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase 2 subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 1052722 - 1054803 bp
Length : 2082 bp
Strand : -
Note : silverDB:etchr00929

DNA sequence :
ATGCTCAATTTGTATGATGACAATGCCCATATTCAGTTTGAGAAAGACAGAGAGGCCACGCGTCAGTACTTTATTCAGCA
CGTTATTCCGAACAGCGTTCAGTTCGATTCCATCGCCGAACGCCTGCAGTTTTTAGTGGCTGAAGGCTATTATGAAGCTG
ACGTGTTGAATGCGTATCCGTTTGAGTTTGTCTGCTCGCTGTTCGCTGAGGCCACCGCACGGCGCTTTCGCTTTCAGACA
TTCCTCGGTGCCTGGAAGTTTTACACCAGCTATACGCTGAAAACCTTCGATGGCAAACGCTATCTGGAAGGCTTTACCGA
ACGCGTGTGTATGGTCGCGCTAACGTTAGCGAAAGGTGACCAGCCGCTGGCGCTGGCGCTGACGGATGAAATTCTGAGCG
GCCGCTTCCAGCCTGCAACACCGACCTTCCTGAACTGCGGTAAACAGCAGCGCGGCGAGCTGGTTTCCTGCTTCCTGTTG
CGTATTGAAGACAATATGGAGTCGATTGGGCGGGCGGTGAATTCAGCGCTGCAACTGTCCAAACGCGGCGGCGGCGTGGC
GTTTCTGCTGTCAAACCTGCGTGAGGCCGGTGCGCCGATCAAACGTATCGAAAATCAGTCTTCCGGCGTGATCCCGGTGA
TGAAAATGCTGGAAGATGCCTTCTCCTACGCCAACCAGCTGGGAGCACGTCAGGGGGCTGGCGCGGTCTACCTGCATGCG
CACCATCCGGATATCCTGCGTTTCCTCGATACCAAGCGCGAAAATGCCGACGAGAAGATCCGCATCAAAACCCTGTCGCT
GGGCGTAGTGATCCCCGATATCACCTTCCAGCTGGCGAAAGATAACCAGCAGATGGCGCTGTTCTCTCCCTATGACGTGG
AGCGAATTTATGGTTTACCGTTCGCCGATATCAGCATCAGCGAAAAGTACCACGAGATGCTGAACGACGCGCGTATTCGC
CGCACGTTCATCAACCCACGTGAATTTTTCCAGACGCTGGCAGAGATCCAGTTTGAGTCCGGATATCCCTATATCATGTT
TGAAGATACGGTGAACCGGGCAAATCCTGTCCACGGGCGTATCAATATGAGTAACCTGTGTTCGGAAATCCTACAGGTTA
ACAGCCCGACCGAATATCACGATGACCTGAGCTATCGCCGCATCGGCAAGGATATTTCCTGTAACCTCGGCTCGCTGAAT
ATCGCCCATGCGATGGATTCTGCTGATTTTGCCCGCACGGTGGAGATCGCCGTACGCGGACTGACGGCGGTATCCGATCA
AAGCCATATCCATTCGGTGCCGTCGATCGAACAGGGCAACGCGCAGTCACACGCTATTGGCCTGGGGCAGATGAACCTGC
ACGGCTACCTGGCGCGGGAAGGTATCCAGTACGGCTCAGAAGCAGGCCTGGACTTCACTAATATTTATTTCTATACCGTG
ACCTACCATGCCCTGCGTACCTCTAACCAGCTGGCGCGTGAGCGCAGTACCACCTTCAGCGGGTTTGCTCAATCCCGTTA
TGCCAGCGGCGAATATTTCAATCCGTATCTGGAGCAGAGCTGGCAACCGCGTACCTCGCAGGTCGCCGCGCTGTTTGCCA
ACGCCGGGATTGCCATCCCAACGCGTCAGCAGTGGCAGACGCTGAAAGACGCGGTGATGCAGTACGGGCTGTACAACCAG
AATTTGCAGGCCATTCCCCCGACGGGCTCGATCTCCTACATCAACCATGCCACCTCAAGCATTCACCCTATTGTGTCGCG
CATTGAGATCCGTAAAGAGGGGAAGACCGGCCGCGTCTACTATCCGGCCCCCTTTATGAATAACGATAATCAGGCGTTTT
ATCGCGATGCTTATGATATCGGCCCGGAAGCGATTATCGACACCTATGCTGAAGCCACACGGCACGTCGATCAGGGGCTG
TCGCTAACGCTATTTTTCCGCGACACCGCCACCACGCGTGATATCAACCGCGCGCAAATTTACGCCTGGAAGAAAGGCAT
TAAAACGCTGTACTACATTCGTCTGCGTCAGATGGCCCTGCAAGGCACTGAGGTCGAAGGTTGTGTCTCCTGCTCGCTCT
GA

Protein sequence :
MLNLYDDNAHIQFEKDREATRQYFIQHVIPNSVQFDSIAERLQFLVAEGYYEADVLNAYPFEFVCSLFAEATARRFRFQT
FLGAWKFYTSYTLKTFDGKRYLEGFTERVCMVALTLAKGDQPLALALTDEILSGRFQPATPTFLNCGKQQRGELVSCFLL
RIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHA
HHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKDNQQMALFSPYDVERIYGLPFADISISEKYHEMLNDARIR
RTFINPREFFQTLAEIQFESGYPYIMFEDTVNRANPVHGRINMSNLCSEILQVNSPTEYHDDLSYRRIGKDISCNLGSLN
IAHAMDSADFARTVEIAVRGLTAVSDQSHIHSVPSIEQGNAQSHAIGLGQMNLHGYLAREGIQYGSEAGLDFTNIYFYTV
TYHALRTSNQLARERSTTFSGFAQSRYASGEYFNPYLEQSWQPRTSQVAALFANAGIAIPTRQQWQTLKDAVMQYGLYNQ
NLQAIPPTGSISYINHATSSIHPIVSRIEIRKEGKTGRVYYPAPFMNNDNQAFYRDAYDIGPEAIIDTYAEATRHVDQGL
SLTLFFRDTATTRDINRAQIYAWKKGIKTLYYIRLRQMALQGTEVEGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 71