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Name : outD (ETA_07920) Accession : YP_001906736.1 Strain : Erwinia tasmaniensis Et1/99 Genome accession: NC_010694 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 883685 - 885625 bp Length : 1941 bp Strand : - Note : silverDB:etchr00783 DNA sequence : ATGAAACTGATGAACTCCCACCGCCCAGCCAGCGCCAGGCGTTTGCCCCTTCTGCTGCTGATTTGCTCGCTATTCTCCTC CTCCGTGCAGGCGGAAGGCTATCAGGCAAGCTTTAAAAACACCGAGATCGAAGAGTTTATTAACACCGTAAGTAAATCAC TCAATAAAACCATCATTATCGATCCGACGGTGAAAGGAAAAATTAGCGTCCGCAGCTATGAAACGCTCGATGCCGATCAG TATTACCAGTTTTTTCTCAGCGTACTAGAGGTCTACGGCTACACCGCGATCAGTATGGATAACGGCGTGCTTAAGATTAT TCCCTCGAAAAGTGCCAAAGGTGCCGCCGTGCCGTTTGTCACGGGTGGGGCCAGCGTGAGCGGCGATGAGATCATTACCC GGGTTGTGCCACTTCAATTTGTCGCGGCTAAAGATCTGGCTCCGTTATTACGCCAGCTTAACGATGCGGCAGCAGGTAGC GTCGTTCATTACGACCCCAGTAACGTACTATTAATGACGGGCAGAGCGGCGGTCATCAGTCAGCTGATGGCCATCGTCGA AAATATCGATCTGCCTGAAGATACGACGGTTAACACCGTGAAATTACAGTGGGCATCAGCGCCTCAGGTCGCAGAGATCC TCAATTCAATCAAGGGTGATAACAAAACGGCAGGCGGTAATAAATCGTTCGCCAAAGCCGTTGCGGATACGCGTACCAAT TCCGTGCTGCTTACCGGCGACGAGCTGGCACGCCAGCAGCTGATCGACGCGGCCAGAAATCTGGACGAGGAGAAAGACCA CAGCAGCAACTCCAAAGTGTTTTATCTGAAACATGCCAAAGCGGAGAACCTGTTAGAGGTTCTGAGTGGCGTAAGCGGCT CTATACAGGATAAAGCAGAGTCTAAAACCGCCAGCCCTGTCGCGATGTCAAAAGACATTGTGGTGAAGGCCGACACCTAT ACCAACTCCCTGATTATCAACGCGCCACCGGACGTGATGGGCGATCTTGAAGATATCATTAACCGACTCGATATCAGCCG TGCACAGGTGCAGGTAGAAGCGATCATCGTTGAGGTTCAGGATGCTGACGGGCTGGCGCTGGGCGTTCAGTGGTTTAACC AACACGGAGGGGGAACGCAGTTTCCGGCAGCCGATGCGCCAGTCAGTCACCTGATTGGCAGCACCGTTGCCGAAACACTG AGCAAAACCAACGGTCTGGCTGCGGGCTTCTATCACGGTAACTGGGCCGGATTATTTAACGCGCTGCAAACCAACAGCCT GAATAATATTTTGGCCACGCCGAGTATTGTGACGCTGGACAACATGGAAGCCGAATTCACCGTTGGCCAGGACGTCCCTA TTCTCACCGGCTCACAAACCACCAGCGGCGATGGCGTATTCAACTCGGTCGATCGTAAAAGCGTGGGTATCAAACTGAAA GTGAAGCCGCAAATCAACGAAGGCGACTCGGTGTTGATGGAAATTGAGCAGGAAGTCTCCAGCGTGGCAGAACAGAGTTC GGTCGATCCGCTGGGAGCCACCTTCAATACCCGCCTGGTCAAGAATGCGGTTCTGGTTCAAAGCGGTAAAACCGTCGTGG TCGGCGGGCTGCTTGATACCACACATAGCAATGTAGAGAGCAGCGTTCCGTTGCTAGGCAAAATCCCGTTCATCGGCGGG CTGTTCCGTTACACCTCTGATAAAAAAAGTAAACGCAACCTGATGCTGTTTATTCGCCCAACGATTATCCGTCAGCAGGA CAGCTTTGATCTTACCAGCGGCGGCAAACTGAAAAACTTCCGCGAAACGCTCAGCGAAGAGGAAGGAGACAAACGCATCG GTAAAGCGATCGATGAGAATTTGTCCGGCAAGCAGAGCAATCAGGCGCTGATGGAAACACAGAAGCAGATCGCTGATTTT TATCGGAAACAGCCGCGATGA Protein sequence : MKLMNSHRPASARRLPLLLLICSLFSSSVQAEGYQASFKNTEIEEFINTVSKSLNKTIIIDPTVKGKISVRSYETLDADQ YYQFFLSVLEVYGYTAISMDNGVLKIIPSKSAKGAAVPFVTGGASVSGDEIITRVVPLQFVAAKDLAPLLRQLNDAAAGS VVHYDPSNVLLMTGRAAVISQLMAIVENIDLPEDTTVNTVKLQWASAPQVAEILNSIKGDNKTAGGNKSFAKAVADTRTN SVLLTGDELARQQLIDAARNLDEEKDHSSNSKVFYLKHAKAENLLEVLSGVSGSIQDKAESKTASPVAMSKDIVVKADTY TNSLIINAPPDVMGDLEDIINRLDISRAQVQVEAIIVEVQDADGLALGVQWFNQHGGGTQFPAADAPVSHLIGSTVAETL SKTNGLAAGFYHGNWAGLFNALQTNSLNNILATPSIVTLDNMEAEFTVGQDVPILTGSQTTSGDGVFNSVDRKSVGIKLK VKPQINEGDSVLMEIEQEVSSVAEQSSVDPLGATFNTRLVKNAVLVQSGKTVVVGGLLDTTHSNVESSVPLLGKIPFIGG LFRYTSDKKSKRNLMLFIRPTIIRQQDSFDLTSGGKLKNFRETLSEEEGDKRIGKAIDENLSGKQSNQALMETQKQIADF YRKQPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-99 | 43 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 2e-105 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| outD | YP_001906736.1 | general secretion pathway protein D | VFG2047 | Protein | 4e-97 | 43 |
