Gene Information

Name : ETA_05690 (ETA_05690)
Accession : YP_001906513.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Unknown
Product : capsid portal protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 636344 - 637399 bp
Length : 1056 bp
Strand : -
Note : silverDB:etchr00564

DNA sequence :
ATGAGCAAACGCAGAAACCGCACGCGCACACAGTCCGTGCCGCAGCCGGATAACATGACCAGCGGGGCAGCGTCGGAGGC
TTTTACCTTTGGCGACCCGATCCCGGTGCTGGACCGCCGCGAATTGCTCGATTACGTGGAGTGCGTTATCAATGATCGCT
GGTATGAGCCGCCCGTAAGCGTTGACGGACTGGCGCGCACGTTCCGCGCCGCCGTGCATCACAGCTCACCTATAAGCGTA
AAATGCAATATTCTGGCGAGCACATTTATCCCGCACCCACTTTTGAGCCAGCAGGCTTTTACCCGCTTTGCGATGGATTA
CCTGATTTTCGGCAATGCCTATCTGGAGAAGCGGATCAGCCGCCTCGGCAACACGCTGAAACTGGAACCCTCGCTTGCAA
AATATACGCGTCGCGGGCTTGACCTCGACACCTACTGGTATGCGCATTACGGCCTTAACACTGAACCGTATGAGTTTACA
AAGGGCAGCGTCTTTCACCTGATGGAGCCGGATATCAATCAGGAAATTTACGGCGTGCCGGGCTACCTGTCGGCCATCCC
GTCTGCGCTGCTTAATGAGTCGGCCACGCTGTTCCGCCGCAAGTATTACCTGAACGGCAGCCATGCGGGTTTTATCATGT
ATATGACTGACCCGGCGCAGAGCCAGCAGGACGTGGACAATATCCGCAGCGCCATGAAAAGCGCAAAGGGCCCTGGCAAC
TTCCGCAACCTGTTTATGTACAGCCCGAACGGGAAGAAAGACGGCATCCAGATCATCCCGCTGTCAGAGGTGGCGGCCAA
AGATGAGTTCCTGAATATCAAAAACGTGAGCCGTGATGACATGCTGGCCGTGCATCGCGTACCGCCGCAGCTAATGGGGA
TAATCCCAAACAATACCGGCGGGTTTGGTGATATTGAAAAGGCCAGCCGCGTGTTTGTACGAAACGAACTCATTCCGCTG
CAGGCACGTATGAAGGAGTTAAATGACTGGCTCGGACTCGGCCAGGAGGTTATCAGGTTTGCGCCTTATAACCTCGATCT
GGAAGATGGCAACTAA

Protein sequence :
MSKRRNRTRTQSVPQPDNMTSGAASEAFTFGDPIPVLDRRELLDYVECVINDRWYEPPVSVDGLARTFRAAVHHSSPISV
KCNILASTFIPHPLLSQQAFTRFAMDYLIFGNAYLEKRISRLGNTLKLEPSLAKYTRRGLDLDTYWYAHYGLNTEPYEFT
KGSVFHLMEPDINQEIYGVPGYLSAIPSALLNESATLFRRKYYLNGSHAGFIMYMTDPAQSQQDVDNIRSAMKSAKGPGN
FRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMLAVHRVPPQLMGIIPNNTGGFGDIEKASRVFVRNELIPL
QARMKELNDWLGLGQEVIRFAPYNLDLEDGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 4e-139 80
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 4e-139 80
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 5e-93 57