Gene Information

Name : hrpB (ETA_05280)
Accession : YP_001906476.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : HrpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 592669 - 593031 bp
Length : 363 bp
Strand : +
Note : silverDB:etchr00528

DNA sequence :
ATGAAAATCACTGCTGGAAATGCCCCGTCTCTTGCCATCAGCGCGGGAGATCATGACGTCAGTTCGGCCCCCGGCCACAC
GGCGGATGCCTCCTGGTTCAGCGCCGCGCTGCAAGCACCCGCGAAGTCTGCCGGTAACGACAATCAATCGTGGATAAATA
AAGTCGCCAGCCTGTCTGAAGCCGCCAGCGGCCACGCGAACCAGGCGGACAGGGCGCTGGCGAAGGTCTCGCGCAGTCTT
GATTCGCAAAACGTGATGGACGCTAACCGCACCTTATCTTCTTATTATCTGGAAAGCCTGCTCAACGCAAAACTGGTTGG
CAAAGGCGTACAGAGTCTGGAAAAACTGACCAACTTGCAGTAA

Protein sequence :
MKITAGNAPSLAISAGDHDVSSAPGHTADASWFSAALQAPAKSAGNDNQSWINKVASLSEAASGHANQADRALAKVSRSL
DSQNVMDANRTLSSYYLESLLNAKLVGKGVQSLEKLTNLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB AAB49173.1 HrpB Virulence Hrp PAI Protein 9e-43 85
hrpB AAT96280.1 HrpB Virulence S-PAI Protein 7e-16 48
hrpB AAT96321.1 HrpB Virulence S-PAI Protein 5e-16 48
hrpB AAT96360.1 HrpB Virulence S-PAI Protein 1e-15 48
hrpB ABA47315.1 HrpB Virulence S-PAI Protein 3e-17 42