Gene Information

Name : cbrA (ETA_04690)
Accession : YP_001906420.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : achromobactin-binding periplasmic protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 544645 - 545490 bp
Length : 846 bp
Strand : +
Note : silverDB:etchr00469

DNA sequence : 
ATGCCACAGCAGGTGGAAAACGATGTTGGCGCATACGGCGCGCCCACAGAACAGGGTATCGTCCTCGATCGGCTGTCAGC
CGGCTACGGTAAACAGCGCATTGTTGATGATGTCAGCCTGACCATTCCCCGTGGGAAGCTGACGGTACTGGTCGGGGCTA
ACGGCTCCGGGAAATCCACGTTGTTGACCACTATTGCGCGTATGCTTAACCCGCTCGGCGGCAGCGTACGTCTGGACGGT
AAATCCATCCATCATCAGCCTACCAAAGCCGTGGCGCGCCAGCTTGGCATGCTGCCACAGTCACCGCTGCTGCCGGAAGG
ACTGACGGTATTTGAGCTGGTATCACGCGGGCGTTATCCCTGGCAGCACTTTATGCGCCAGTGGTCGGCACAGGATGAGC
AGGCGGTAAACGATGCCATGCGCCTGACCGGCACGCTGGACTTAGCCCATTTGCCGGTTGACAGCCTCTCCGGCGGCCAG
CGGCAGCGCTGCTGGATCGCGATGGCGCTGGCGCAGCAAACCGCCACCATCCTGCTGGATGAGCCGACGACCTTCCTCGA
CCTGCGCTATCAGGTGGAGATCCTTGAGCTGCTAAGCGATCTGACGCGGCGGCACGGGCGCACGGTTGTGGTGGTGCTGC
ACGACCTTAACTTCGCGCTGAACTATGCCGATACGCTGGTGTTTCTTAAACGCGGGCGGCTGGCGGGCATCGTGAGCGAG
GCGGAAAACTGTAGCGCGGCGTTGATTAAAAGCGTGTTTGACGTTGAGGTGCAGATGTCGGTCAACCCGTTAACCGGTCG
GCCTTTCTTTATGCCGTTTCGCCGCCGTGATGAGGTGGGGGGATGA

Protein sequence : 
MPQQVENDVGAYGAPTEQGIVLDRLSAGYGKQRIVDDVSLTIPRGKLTVLVGANGSGKSTLLTTIARMLNPLGGSVRLDG
KSIHHQPTKAVARQLGMLPQSPLLPEGLTVFELVSRGRYPWQHFMRQWSAQDEQAVNDAMRLTGTLDLAHLPVDSLSGGQ
RQRCWIAMALAQQTATILLDEPTTFLDLRYQVEILELLSDLTRRHGRTVVVVLHDLNFALNYADTLVFLKRGRLAGIVSE
AENCSAALIKSVFDVEVQMSVNPLTGRPFFMPFRRRDEVGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-51 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-46 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-50 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-50 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-50 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-50 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-42 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-43 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-43 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-43 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-43 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-51 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-51 41
unnamed AAL67370.1 ferric-enterobactin-transport protein Not tested PAI II CFT073 Protein 3e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbrA YP_001906420.1 achromobactin-binding periplasmic protein BAC0164 Protein 2e-46 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbrA YP_001906420.1 achromobactin-binding periplasmic protein VFG0925 Protein 2e-52 47
cbrA YP_001906420.1 achromobactin-binding periplasmic protein VFG1042 Protein 2e-46 46