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Name : mrfC (ETA_04030) Accession : YP_001906354.1 Strain : Erwinia tasmaniensis Et1/99 Genome accession: NC_010694 Putative virulence/resistance : Virulence Product : outer membrane platform usher (mannose-resistance fimbriae), MrfC protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 467215 - 469755 bp Length : 2541 bp Strand : - Note : silverDB:etchr00403 DNA sequence : ATGAATGTCTACCGCTATTTCGCCGTACGCCCTCTTTCCGCGCTGCTGGCTTTAGCTGCATTGGTGAATCTTCCGGCGTT GGCTGTAGAAACGATCGAGTTCAACACCGATGTGCTGGATGTTAAAGACCGCAGCAAAATCGATCTGAGTGATTTCTCCC GAGCTGATTATCTGATGCCGGGGCAATATCAGATGGTTGTCCGAATCAACAAAAACGAGCTGCGCGAGCAAAACATTACG TTTATGCCGCCCGAAGACGATCCGAAAGGCAGCATACCCTGCCTGACGCCGGAAATTGTCAAACAGCTCGGCTTCACCGC GGCCGCCATGCGTGAATTGCGCTGGTGGAACAATGCGCAATGTCTGAGATTAGACTCTCTGAAGGGAATGACTGCCCGTG GTGATTTAGGCAGTGCATCGCTATACATAAACGTTCCCCAGGCGTATCTGGAGTACGTTGCTGACAACTGGGATCCGCCT TCACGCTGGGATAACGGTATCAGCGCGCTGGTGTTCGATTATAACCTGAATGCCCAGAGTACCCATCAGTCTAAAGGCCA CGAAACCCAGACTCTGAGCGGTAACGGCACCACCGGATTTAACCTCGGCGCATGGCGATTTCGTGCCGACTGGCAGGGGG GTTACGACCACTCTACCGGTAAGGACGAGGGCAGCAACAATAACTGGGATATGAGCCGCTACTACGCGTATCGGGCGATT GCATCGCTGCGCGCCAAGCTGATGATGGGTGAGAGCTACCTGAACTCCACCATTTTCGACAGCTTCCGCTTCCTCGGCGC CAGCCTGGTCTCCGATGACAATATGCTGCCGCCTAACCTGCGCGGCTACGCGCCGGAAGTGTCCGGGGTGGCTAAGACCA ATGCAAAAGTCACGGTAAGCCAACAGGGGCGTGTGCTTTACGAAACGACCGTATCCTCGGGTCCGTTCCGCATCCAGGAT CTTAATTCGGCGACCACCGGTACGCTGGATGTAAAAATTCAGGAACAGGACGGAACCAGCCGCACTTTCCAGGTCAGCAC CGCCAACGTTCCCTATCTGACCCGACCAGGCCAGCTGCGCTATAAGTTAGCGCTGGGTAAACCCTCTGACCTGAAGCATA ACACCCAGGGTCCGGGATTCGCCGCCAGCGAACTCTCATGGGGAATTAATAACGGCTGGTCGCTGTACGGCGGATCCGTG CTGGCCGGCGACTACAACTCTGCGGCGTTGGGCGTTGGGCGCGATCTGCTGTCATTCGGCGCGCTGGCATTCGACGTTAC CCAGTCGCGTGCCAACCTGCCACAGCAGGGAACGTTAAGCGGGCGTTCATTCCGTCTGAGCTATTCAAAACGCTTCGACG AGTATGACAGCCAGGTGACCTTTGCCGGCTATCGCTTCTCCGAGCGCGACTATCTGAGTATGACGCAGTACCTTGATACC CGCTATCACGGGAACAACTACGGCAGCAGCAAAGAACTTTATACCGTTACCTTTAATAAGCAGTTCCCGGATATCGGGAT CAGCTCCTATATCAACTATAGCCATCGTACTTACTGGGATCGCCCGGCTAACGACAACTATAACCTGTCGCTGTCGCGCT ATTTCAACGTAGGACGCGTGCACAACGTCAGCGTTAACCTCTCGGCCTATCGTAACAGTTATAACAATCGCGATGACGAC GGCATGTTCCTTAGCCTGACCGTACCCTGGGGAAATACTGCCAGTCTCACCTATGACGGACAGTTCAACAGTAGCGGTAG CAGCAATATGGTGGGTTATTACGATCGTATCGACGATAACAACTCCTACAACGTTAAAACCGGCGTCGCACAGCAGGGTC GTGGCGCGGCCAGCGGTTACTTCACTCATGATGGCGATATGGCGCAGATGACCGCCAATGCCAGCTATGAAAGCGGAAGA TACTCCTCGGTCGGACTGGGTTTACAGGGCGGTCTCACCGCCACGCCGCAGGGCGCCGCGGCGCACAGGATTAACGCGAT GGGAGGCACCCGTATGATGGTCGATACCGACGGCGTCAGCGATGTTCCGATACGTGGTTATGGCGGCCTCAGCCACAGTA ACCATTTCGGTAAAGCGGTTGTCAGCGACGTAAACAGTTACTACCGCAACAGCATCTCGGTCGACGTTAACGCCCTGCCG GATAACGTGGATGCCACCCGCTCGGTGGTGCAAGGCACGCTGACCGAAGGTGCCGTGGGCTACCGCCGCTTCGGCGTCAT TTCCGGAGAAAAAGCGATGGCGAGCCTGCGGTTGGCGGATGGTTCTTCTCCACCGTTTGGCGCCACCGTAGTGAACCAGA ACCACTATCAAACCGGCATCGTTGGTGATAATGGCAGCGCATGGTTAACCGGCATTAAGCCTGGTGAAACGATGCGTGTG CGCTGGAATGGAAAAACGCAGTGCGTTATTTCTCTGCCTTCGCCGCTGCCGCCGCTGACCAGCAACCTGCTGTTGCCATG TCGCGCAGCAGGAAATGACCTGGCAAAAGACGATGCCGTAGAGAAAGAGAACGGCCTGTAA Protein sequence : MNVYRYFAVRPLSALLALAALVNLPALAVETIEFNTDVLDVKDRSKIDLSDFSRADYLMPGQYQMVVRINKNELREQNIT FMPPEDDPKGSIPCLTPEIVKQLGFTAAAMRELRWWNNAQCLRLDSLKGMTARGDLGSASLYINVPQAYLEYVADNWDPP SRWDNGISALVFDYNLNAQSTHQSKGHETQTLSGNGTTGFNLGAWRFRADWQGGYDHSTGKDEGSNNNWDMSRYYAYRAI ASLRAKLMMGESYLNSTIFDSFRFLGASLVSDDNMLPPNLRGYAPEVSGVAKTNAKVTVSQQGRVLYETTVSSGPFRIQD LNSATTGTLDVKIQEQDGTSRTFQVSTANVPYLTRPGQLRYKLALGKPSDLKHNTQGPGFAASELSWGINNGWSLYGGSV LAGDYNSAALGVGRDLLSFGALAFDVTQSRANLPQQGTLSGRSFRLSYSKRFDEYDSQVTFAGYRFSERDYLSMTQYLDT RYHGNNYGSSKELYTVTFNKQFPDIGISSYINYSHRTYWDRPANDNYNLSLSRYFNVGRVHNVSVNLSAYRNSYNNRDDD GMFLSLTVPWGNTASLTYDGQFNSSGSSNMVGYYDRIDDNNSYNVKTGVAQQGRGAASGYFTHDGDMAQMTANASYESGR YSSVGLGLQGGLTATPQGAAAHRINAMGGTRMMVDTDGVSDVPIRGYGGLSHSNHFGKAVVSDVNSYYRNSISVDVNALP DNVDATRSVVQGTLTEGAVGYRRFGVISGEKAMASLRLADGSSPPFGATVVNQNHYQTGIVGDNGSAWLTGIKPGETMRV RWNGKTQCVISLPSPLPPLTSNLLLPCRAAGNDLAKDDAVEKENGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 52 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-172 | 48 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 8e-171 | 48 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 6e-171 | 48 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 3e-172 | 48 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 5e-172 | 48 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 5e-172 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mrfC | YP_001906354.1 | outer membrane platform usher (mannose-resistance fimbriae), MrfC protein | VFG1548 | Protein | 1e-172 | 48 |
| mrfC | YP_001906354.1 | outer membrane platform usher (mannose-resistance fimbriae), MrfC protein | VFG0884 | Protein | 1e-172 | 48 |
| mrfC | YP_001906354.1 | outer membrane platform usher (mannose-resistance fimbriae), MrfC protein | VFG0895 | Protein | 2e-172 | 48 |
